[Genome] Query about Ensembl Ids

Archana Thakkapallayil archanat at soe.ucsc.edu
Tue Nov 6 09:53:54 PST 2007


Hello Lalitha,

This information can be obtained from the Table Browser using two 
tables, knownToEnsembl and kgXref. If you have the list of Ensembl Ids, 
you could get the corresponding Known Gene Id from the table 
'knownToEnsembl' and using this kgID you could extract the corresponding 
RefSeq ID from the table 'kgXref'.

I hope this information is helpful to you.  Please don't hesitate to 
contact us again if you require further assistance.

Regards,

Archana
UCSC Genome Bioinformatics Group


Viswanath, Lalitha (NIH/NCI) [C] wrote:
> Hi
>
> Does UCSC offer a mapping of Ensembl Gene/Protein Ids to RefSeq or
> Genbank or Unigene Cluster Ids?
>
>  
>
> Thanks
>
> Lalitha
>
> _______________________________________________
> Genome maillist  -  Genome at soe.ucsc.edu
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>   


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