[Genome] CpG island prediction method

Kayla Smith kayla at soe.ucsc.edu
Tue May 15 13:12:48 PDT 2007


Christopher:

The description page for the CpG Islands track has more details than the 
table description.  You can find this information by clicking on the 
vertical blue-or-grey bar on the left hand side of the CpG Islands 
track, or by clicking on the track controls.  You can also get to this 
information here:
http://genome.ucsc.edu/cgi-bin/hgTrackUi?g=cpgIslandExt

I hope this information is useful to you.  If you require further 
assistance please don't hesitate to contact us again.

Kayla Smith
UCSC Genome Bioinformatics Group

Christopher Previti wrote:
> Dear sirs,
> 
> I was wondering if there is a more detailled description of the
> development of the
> algorithm used to predict the CpG islands in your table?
> I know it's very similar to Newcpgseek, but there is very little documentation
> available for that program as well.
>  I would like to include a detailled description of the algorithm in
> my thesis, but the table description is a little fague on the details.
> 
> Best regards,
> 
> Christopher Previti
> _______________________________________________
> Genome maillist  -  Genome at soe.ucsc.edu
> http://www.soe.ucsc.edu/mailman/listinfo/genome



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