[Genome] question about URL construction
Donna Karolchik
donnak at soe.ucsc.edu
Thu May 3 13:36:56 PDT 2007
hi Jing,
To add to what Galt says, if you are using one of the org names
that contains white space (e.g. D. melanogaster), be sure to put a
"+" in place of the white space, i.e. D.+melanogaster.
-Donna
-----------------------------------
Donna Karolchik
UCSC Genome Bioinformatics Group
http://genome.ucsc.edu
----- Original Message -----
From: "Galt Barber" <galt at soe.ucsc.edu>
To: <jing_gao at agilent.com>
Cc: <genome at soe.ucsc.edu>
Sent: Thursday, May 03, 2007 1:31 PM
Subject: Re: [Genome] question about URL construction
>
> Check out name, description, organism, etc. in dbDB in this
> file:
>
> http://hgdownload.cse.ucsc.edu/admin/hgcentral.sql
>
> -Galt
>
>
> On Thu, 3 May 2007 jing_gao at agilent.com wrote:
>
>> Hi,
>>
>>
>>
>> I'm trying to figure out how to construct an URL to share my
>> annotation tracks with others. I'm following your instruction
>> on
>> http://genome.ucsc.edu/goldenPath/help/hgTracksHelp.html#SHARE,
>>
>> Which works well for human. And I could figure out org=mouse
>> and org=rat.
>>
>>
>>
>> But could you tell me the String values I should use for "org="
>> in the case for the following species:
>>
>>
>>
>> A. thaliana
>>
>> C. elegans
>>
>> D. melanogaster
>>
>> D. rerio
>>
>> G. gallus
>>
>> H. sapiens human
>>
>> M. musculus mouse
>>
>> R. norvegicus rat
>>
>> S. cerevisiae
>>
>> S. pombe
>>
>> X. tropicalis
>>
>>
>>
>>
>>
>>
>>
>> Thank you very much.
>>
>>
>>
>> Jing
>>
>> _______________________________________________
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>>
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