[Genome] Using tables to batch extract sequence data

[Maureen J Donlin]

Hi,

I am trying to use the Tables feature to batch extract sequence from 
the mouse genome.  I set the following tracts:
genome: Mouse
assembly: Feb 2006
group: Mapping and Sequencing tracts
track: Assembly

I used the defined regions and input the following:
chr8:86583389-86583638
chr8:24602164-24602613
chr7:126691122-126691571

Output format: sequence
Click on get output
Do not add any extra bases

When I click on get sequence, I get back
 >mm8_gold_AC164432.3 range=chr8:86537462-86658633 5'pad=0 3'pad=0 
revComp=TRUE strand=- repeatMasking=none
  which is over 100 Kb of sequence rather than just the region I put in.
What am I doing wrong?  When I put in chr8:86583389-86583638 in the 
position/search box of the browser and click the DNA button at the 
top, I get back just that region.

Any suggestions would be appreciated as I have ~200 regions to pull out.

thanks,
Maureen Donlin




Maureen J. Donlin, Ph.D.

Assistant Research Professor
Dept. of Biochemistry & Molecular Biology
Saint Louis University School of Medicine

1402 S Grand
M411 Schwitalla Hall
St. Louis, MO  63104
314-977-8858