[Genome] mapping chromosomal position between different version
Rachel Harte
hartera at soe.ucsc.edu
Fri Mar 23 09:26:40 PDT 2007
Hello Lauren,
You can convert a list of positions from one assembly to another quite
easily using our liftOver too. This is available through a web server and
also for download to use locally on the command line. Here is the link to
the web-based liftOver:
http://genome.ucsc.edu/cgi-bin/hgLiftOver
Please let us know if you have further questions.
Rachel
Rachel Harte
UCSC Genome Bioinformatics Group
http://genome.ucsc.edu
On Fri, 23 Mar 2007, Rong Lu (rlu at Princeton.EDU) wrote:
> Hello,
>
> I have a large set of chromosomal position in version March 2005 that I would like to find their position in the current version (Feb 2006). How can I download the data base match between these different versions?
>
> Thank you very much. I am looking forward to your reply.
>
> Lauren
>
> ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
> Rong Lu (Lauren)
>
> Department of Molecular Biology
> Princeton University
> Princeton, NJ 08544
>
> rlu at princeton.edu
> 609-258-7748 (office)
> 609-258-5657 (lab)
> ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
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