[Genome] Custom plots

Heather Trumbower heather at soe.ucsc.edu
Thu Mar 22 17:33:20 PDT 2007


On Thu, 22 Mar 2007, Heather Trumbower wrote:

> Anton:
>
> We currently have support for custom WIG files, but not for custom MAF files. 
> The documentation for custom WIG files is available at
> http://genome.ucsc.edu/goldenPath/help/wiggle.html.
>
> I thought I would also mention, if you are able to configure our existing
> Conservation tracks to suit your needs, you can export the image as PDF or 
> postscript.   We support a number of different configuration options for
> Conservation tracks.
>
> I hope this helps, let us know if you have further questions.
>
> Heather Trumbower
> UCSC Genome Bioinformatics Group
>
>
> On Thu, 22 Mar 2007, Anton Valouev wrote:
>
>> Hello,
>> I am trying to display a custom plot on the genome browser,
>> a plot like a conservation score that is a part of your browser.
>> Is there any way to compile a custom track to display a plot
>> for each position of the genome?
>> 
>> Thanks in advance.
>> Very best, Anton.
>> _______________________________________________
>> Genome maillist  -  Genome at soe.ucsc.edu
>> http://www.soe.ucsc.edu/mailman/listinfo/genome
>> 
>


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