[Genome] A problem with the soft-masking!

[Galt Barber]

Here is another link related to this topic:

http://www.cse.ucsc.edu/pipermail/genome/2006-February/009783.html

Since the genome-browser pipermail archives are indexed by Google,
you can often find useful things with a google search.

-Galt


On Wed, 14 Mar 2007, Xiaosong Wang wrote:

> Dear Galt,
>
> I really appreciate your sincere help. Yes, I have tried gfServer
> command with  or without "-mask", but I get the same result without
> repmatch report. I simply can not figure out why standalone BLAT didn't
> report this repmatch bases!
> Again, thank you very much for the detailed explanation to psl
> softwares.
>
> Best wishes
>
> Xiaosong
>
>
> Xiaosong Wang
> Department of Pathology, University of Michigan Medical School
> 1150 W.Medical Center Dr. Rm3232, Med Sci I, Ann Arbor, MI 48109
> Phone: 734-763-1224
>