[Genome] UCSC In-Silico PCR

[Archana Thakkapallayil]

Hello Kasper,

Your request for display of PCR products is a reasonable one. 
Unfortunately, we currently do not have a feature like this. This is in 
our future implementation list, but there are some higher priority tasks 
on the list as well. Right now I don't have any estimate of when it 
would be completed.

In the meantime, as a workaround, you could make a simple BED file out 
of the locations of your PCR products and display them as a custom track.

Please let us know if you have any further questions.

Regards,

Archana
UCSC Genome Bioinformatics Group

Kasper Thorsen wrote:
> Hello
>
>  
>
> I am using the UCSC In-Silico PCR function and after submitting the
> primer sequences the genome browser displays the amplified sequence. My
> question is whether it is possible to have the primer position displayed
> in a separate track so it is possible to see the primer position after
> having e.g. zoomed out.
>
>  
>
>  
>
> Kind regards
>
>  
>
> Kasper Thorsen, Ph.D.
>
> Dept. of Clinical Biochemistry
>
> Aarhus University Hospital, Skejby Sygehus
>
> E-mail: kasper.thorsen at ki.au.dk
>
>  
>
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