[Genome] MySQL database of the genome browser

[Bushel, Pierre (NIH/NIEHS) [E]]

Yes thanks a lot.

Pierre

-----Original Message-----
From: Brooke Rhead [mailto:rhead at soe.ucsc.edu] 
Sent: Monday, March 05, 2007 7:16 PM
To: Bushel, Pierre (NIH/NIEHS) [E]
Cc: genome at soe.ucsc.edu
Subject: Re: [Genome] MySQL database of the genome browser


Hello Pierre,

The MySQL database dumps are available from our downloads page:

http://hgdownload.cse.ucsc.edu/downloads.html

Go to your assembly of interest and then click on the "Annotation 
database" link.

The tables are also available on our ftp server, here:

ftp://hgdownload.cse.ucsc.edu/goldenPath/

After choosing the assembly of interest, click on the "database"
directory.

I hope this information helps.  Please do not hesitate to contact us 
again if you have further questions.

--
Brooke Rhead
UCSC Genome Bioinformatics Group



Bushel, Pierre (NIH/NIEHS) [E] wrote:
> Is the MySQL database of the genome browser still available?  I would 
> need the sql commands to create the database and the files as tables 
> to insert into the database.
> 
> Thanks,
> 
> Pierre R. Bushel, Ph.D.
> Head of Microarray and Genome Informatics
> Biostatistics Branch
> National Institute of Environmental Health Sciences
> P.O. Box 12233
> RTP, NC 27709
> (W) 919-316-4564
> (F) 919-316-4649
> bushel at niehs.nih.gov
> 
> 
> _______________________________________________
> Genome maillist  -  Genome at soe.ucsc.edu 
> http://www.soe.ucsc.edu/mailman/listinfo/genome