[Genome] sequence retrieval

David Haynor haynor at u.washington.edu
Mon Jun 11 10:33:48 PDT 2007


hi genome gurus,

i have a text file of genome intervals in the current human genome release 
(each line is something like "1   90000 91000 +" referring to the W 
strand, chromosome 1, positions 90000-91000) and would like to download 
the corresponding bits of sequence via a batch query/file/program.  can 
someone tell me a reasonable way to do this?

thanks in advance.

-dh
David Haynor (haynor at u.washington.edu)
Department of Radiology
Box 357115
University of Washington
Seattle, WA  98195
(206) 543-3320


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