[Genome] Adding Illumina gene array probes ..

Ben Berman bberman at usc.edu
Wed Jun 6 22:25:26 PDT 2007


Hi Heather,

those are actually the SNP arrays.  The one i'm using is a gene  
expression array, model Human_6 V2:

http://www.illumina.com/pages.ilmn?ID=197

Thanks,
ben.

On Jun 6, 2007, at 5:20 PM, Heather Trumbower wrote:

> Hi Ben,
>
> Actually we've received data from Illumina, please see what is  
> available at http://genome-test.cse.ucsc.edu on hg18.   
> Specifically, Illumina gave us the Human Hap 300v3, 550v3 and  
> 650v3.  Is this what you are refering to?
>
> Thanks for your interest and your offer to help.
>
> Heather Trumbower
> UCSC Genome Bioinformatics Group
>
> P.S.  We've also loaded the HapMap SNPs into hg18, also on the test  
> browser, we're in the process of reviewing them, I recall you are  
> interested in this data.
>
>
> On Wed, 6 Jun 2007, Benjamin Berman wrote:
>
>>
>> Hi, would you be interested in adding the probes from Illumina's
>> Human_6_V2 gene array to your database, as you have for Affy chips?
>> We have the sequences if you need them.  Maybe you need permission
>> from illumina or something?
>>
>> thanks,
>> ben.
>> _______________________________________________
>> Genome maillist  -  Genome at soe.ucsc.edu
>> http://www.soe.ucsc.edu/mailman/listinfo/genome
>>

-----
Ben Berman, PhD
Postdoctoral Fellow, Preventive Medicine
Keck School of Medicine of USC
1441 Eastlake Ave., Rm NOR 4423
Los Angeles, CA 90033




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