[Genome] Problems Accessing Horse Sequnce Data

[Glenn Soltes]

Hello UCSC

 

I have been trying to extract a 20,000bp region of the UnChr horse
genome to work with.

 

Seems like it is an impossible task:

 

The sequence browser will give me a target area using a keyword search
and will give me a short sequence that is clearly what I want.  I want
to extract about 10,000 bp upstream and 10,000 bp downstream but the
genome browser refuses to give me anything like the DNA I requested.
For example chrUn:33,286,201-332,884,999 wont give me the genomic
sequence just a lot of un-useful information.

 

FTP Downloading the chrUn and extracting this region should work but the
numbering scheme for the ftp horse chrUn is clearly different from what
the Genome browser uses.  I extract the correct numbered region and the
desired sequence is not there.

 

Is there any way to extract 20,000bp region as DNA sequence using the
UCSC genome browser? 

 

Glenn Soltes 



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