[Genome] WS170 on UCSC Gen Browser?

Hiram Clawson hiram at soe.ucsc.edu
Mon Jul 9 11:45:04 PDT 2007


Good Morning Susan:

The WS170 C. elegans browser is currently undergoing QA processing
here in preparation for release to the public WEB site.  You can view
this copy under development at:
	http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ce4

--Hiram

Susan Strome wrote:
> Dear UCSC Genome Browser:  I am a biology prof moving from Indiana 
> Univ. to join MCD Biology at UCSC next week ... I'm also a member of 
> an NIH ENCODE group.  There are several ENCODE groups that will be 
> working with Nimblegen on ChIP-chip experiments and will want to view 
> results via the UCSC Genome Browser.  Nimblegen data use WS170, and 
> so we are grappling with how to interface with the Gen Browser, which 
> currently uses WS120.  Wormbase people think that perhaps a script 
> can be used to convert the data from one sequence version to another. 
> I am writing to inquire about the alternative possibility of having 
> the Genome Browser group add the WS170 sequence version to the site.
> 
> Thanks for any info on this,
> Susan



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