[Genome] table browser for IMAGE clone information

[Yee, Andrew J.,M.D.]

As a follow up, in terms of using the Table Browser, is there a way you can
browse the table by entering the IMAGE clone number, instead of the GenBank
accession number?

Thanks,
Andrew 

-----Original Message-----
From: Kayla Smith [mailto:kayla at soe.ucsc.edu] 
Sent: Friday, July 06, 2007 1:02 AM
To: Yee, Andrew J.,M.D.
Cc: genome at soe.ucsc.edu
Subject: Re: [Genome] table browser for IMAGE clone information


Andrew,

We have a table for most assemblies called imageClone.  You can download the
imageClone table for the hg18 database here:
http://hgdownload.cse.ucsc.edu/goldenPath/hg18/database/imageClone.txt.gz

If you want more information than that table provides alone, you can go to the
Table Browser, and select the following options:

clade: Vertebrate
genome: Human
assembly: Mar. 2006
group: All Tables
table: imageClone

You can click on the "describe table schema" button to see how this table is
connected to others.  The LNDL link you provide has a lot of information, so I'm
not sure exactly what you're looking for.  If you can be more specific about
what you're looking for, I can help to direct you to the appropriate
information.

I hope this is helpful to you.  Please don't hesitate to contact us again if you
require further assistance.

Kayla Smith
UCSC Genome Bioinformatics Group

On Thu, 5 Jul 2007, Yee, Andrew J.,M.D. wrote:

> Do you have any tables that incorporate I.M.A.G.E clone information (e.g.
> http://image.llnl.gov/)?
>
> Thanks,
> Andrew
>
> Andrew J. Yee, MD
> Instructor in Medicine, Harvard Medical School Assistant in Medicine, 
> Mass. General Hospital Cancer Center
>
>
>
>
>
>
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