[Genome] dm2 9way conservation downloads

[Robert Kuhn]

jim, what do yo uthink of this?

I'm inclined to suggest that he go ahead a reference genome-test.

			--b0b

> From genome-bounces at soe.ucsc.edu  Tue Jan 16 14:38:57 2007
> To: archanat at soe.ucsc.edu
> Cc: genome at cse.ucsc.edu
> Subject: Re: [Genome] dm2 9way conservation downloads
> 
> Hi Archana -
> 
> Thanks for this information.  I should have been more clear in saying  
> that I was interested in a stable link to data for the 9way most  
> conserved track.  There appears to be no way to download the  
> phastConsElements9way.sql & phastConsElements9way.txt.gz files, even  
> at the test site.
> 
> Is it ok to reference the following URL to the test server as a  
> stable link in a manuscript?
> <http://genome-test.cse.ucsc.edu/cgi-bin/hgTrackUi? 
> g=phastConsElements9way>
> 
> Best,
> Casey
> 
> 
> On 16 Jan 2007, at 20:39, Archana Thakkapallayil wrote:
> 
> > Hello Casey,
> >
> > The data for the 9-way alignment with dm2 are still available on  
> > our downloads server, here:
> > http://hgdownload.cse.ucsc.edu/downloads.html#fruitfly
> >
> > Also, the 9-way alignment is available on our test server at:
> > http://genome-test.cse.ucsc.edu/
> >
> > I hope this information is helpful to you. If you have further  
> > questions, please do not hesitate to contact us again.
> >
> > Regards,
> >
> > Archana
> > UCSC Genome Bioinformatics Group
> >
> > Casey Bergman wrote:
> >> Hi -
> >>
> >> I've noticed that the 15way conservation track has now replaced  
> >> the  9way track for dm2, but that the 9way track does appear  
> >> available for  download any longer.  Is this correct?  We have a  
> >> project that used  this data, and it would be good to have a  
> >> stable link to this data.   Any ideas on how this might be done?
> >>
> >> All the best,
> >> Casey Bergman, Ph.D.
> >> Faculty of Life Sciences
> >> University of Manchester
> >> Michael Smith Building
> >> Oxford Road, M13 9PT
> >> Manchester, UK
> >>
> >> Tel:  +44-(0)161-275-1713
> >> Fax: +44-(0)161-275-5082
> >> skype: caseymbergman
> >>
> >> Email: casey.bergman at manchester.ac.uk
> >> Web: http://www.bioinf.man.ac.uk/bergman/
> >>
> >>
> >> _______________________________________________
> >> Genome maillist  -  Genome at soe.ucsc.edu
> >> http://www.soe.ucsc.edu/mailman/listinfo/genome
> >>
> 
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