[Genome] [Fwd: Re: buffer overflow]

Ann Zweig ann at soe.ucsc.edu
Tue Jan 16 11:51:48 PST 2007


Hello again, Gabriel,

	This problem has now been fixed on our test server.  You are welcome to create 
your custom tracks on that server until the fix makes it out to our public 
server (two weeks from today).  Please note that our test server is a
development server; some of the data has not been through our quality control
process.

Find the development server here:
http://genome-test.cse.ucsc.edu/cgi-bin/hgGateway


Regards,

----------
Ann Zweig
UCSC Genome Bioinformatics Group
http://genome.ucsc.edu



Ann Zweig wrote:
> Hello Gabriel,
> 
>     We did fix that bug, but it looks like you have found the bug's evil 
> twin.  So sorry you had to run into this.  I have tracked down the 
> problem to the first data point in your Custom Track:
> 
> chrNA_random    141876165       141876182     >seq1
> 
>     There is *nothing* wrong with this line, but for some reason the 
> Custom Track software does not like that line.  It is nothing that you 
> are doing.  I have asked a developer to look into patching this bug.  
> Sorry for the inconvenience to you.
> 
>     If you remove that line from your custom track, it works just fine 
> (I realize that this is not helpful to you!).
> 
>     I will send you an email when we get this fixed.
> 
> 
> Regards,
> 
> ----------
> Ann Zweig
> UCSC Genome Bioinformatics Group
> http://genome.ucsc.edu
> 
> 
> 
> 
> 
> Gabriel Renaud wrote:
>> Hi,
>>     I saw your reply 
>> (http://www.cse.ucsc.edu/pipermail/genome/2006-September/011584.html) 
>> regarding the error I am getting:
>> */Error/ buffer overflow, size 32, format: %s:%d-%d*
>>
>> Did you guys were able to fix it ?
>>
>> The track I am using if for Zebrafish 2006 with:
>> -----------------------------------------------------
>> browser position chrNA_random
>> browser hide all
>> browser pack refGene
>> browser dense ruler
>> browser dense gap
>> track name=single_0mm description="track" color=0,0,0
>> chrNA_random    141876165       141876182     >seq1
>> chrNA_random    38278694        38278711        >seq2
>> chrNA_random    92441292        92441309        >seq3
>> chrNA_random    87518410        87518427        >seq4
>> -----------------------------------------------------
>>
>> Thank you !
>>
> 



More information about the Genome mailing list