[Genome] knownGene to Gene name (Gene Symbol)

Fan Hsu fanhsu at soe.ucsc.edu
Fri Jan 12 09:10:59 PST 2007


There is cross-reference table, kgXref, which 
has kgId and geneSymbol columns you can use.

The Table Browser should enable you to download a complete list.

Fan.
-----Original Message-----
From: genome-bounces at soe.ucsc.edu [mailto:genome-bounces at soe.ucsc.edu]On
Behalf Of Mathias Ehrich
Sent: Friday, January 12, 2007 8:15 AM
To: genome at soe.ucsc.edu
Subject: [Genome] knownGene to Gene name (Gene Symbol)


Dear UCSC team,

I apologize if this is a stupid question, but I spent two days trying
figure this out -unsuccessfully. 

Is there an easy way to retrieve the gene names (e.g. ETV1) from the
known gene annotations (X87175), or refSeq annotations (NM_004956)? 

I found the refLink table, but I think that really only works the other
way around.

Thanks you very much for your help.

Best regards

Mathias

 

 

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