[Genome] Drosophila Affymetrix timecourse track ?

[Ann Zweig]

Hello again, Thomas,

	The Affymetrix Drosophila Development Signal & Transfrags tracks are now
available on the dm2 browser.

Regards,

----------
Ann Zweig
UCSC Genome Bioinformatics Group
http://genome.ucsc.edu


Ann Zweig wrote:
> Hello Thomas,
> 
>     Thanks for pointing this out.  We will be in contact with the 
> authors to see about displaying these data in the genome browser.
> 
> Regards,
> 
> ----------
> Ann Zweig
> UCSC Genome Bioinformatics Group
> http://genome.ucsc.edu
> 
> 
> sandmann at embl.de wrote:
>> Dear UCSC brower team !
>>
>> Recently, a large microarray study profiling the expression of 
>> transcripts in
>> Drosophila melanogaster has been performed using whole-genome tiling 
>> arrays.
>> In their publication in nature genetics, the authors (Manak et al, 
>> Biological
>> function of unannotated transcription during the early development of
>> Drosophila melanogaster, Nature Genetics - 38, 1151 - 1158 
>> (2006))mention that
>> "all RNA graphs representing data described in this manuscript [...] 
>> will be
>> made available through the UCSC (http://genome.ucsc.edu)." Therefore I 
>> was
>> wondering if you were planning to integrate this large dataset into 
>> the genome
>> browser. (I have tried to import the data into our local installation 
>> of the
>> browser as a .wig annotation file, but failed - most likely due to its 
>> enormous
>> size (400 Mb.) The data is available for public download on a website 
>> hosted by
>> Affymetrix.)
>>
>> Thanks,
>> Thomas Sandmann
>>
>> Thomas Sandmann, PhD
>> EMBL Beidelberg, Germany
>>
>> _______________________________________________
>> Genome maillist  -  Genome at soe.ucsc.edu
>> http://www.soe.ucsc.edu/mailman/listinfo/genome
>