[Genome] Accession in RefGene table
Kayla Smith
kayla at soe.ucsc.edu
Tue Jan 9 14:38:11 PST 2007
Phoenix,
The version of each refSeq is found in the version field of the
gbCdnaInfo table.
You could generate this information from the Table Browser ("Tables" on
the blue bar on the top of the main page) as follows for hg18:
Set the following options:
clade: Vertebrate
genome: Human
assembly: Mar. 2006
group: Genes and Gene Prediction Tracks
track: RefSeq Genes
table: gbCdnaInfo
output format: selected fields from primary and related tables
click "get output"
on the next page check "acc" and "version"
click on "get output" again.
I hope this is helpful to you. Please don't hesitate to contact us
again if you require further assistance.
Kayla Smith
UCSC Genome Bioinformatics Group
Phoenix Kwan wrote:
> Dear sir or madam,
>
>
>
> The accessions of each mRNA in the RefGene table don't have the
> accession versions with them, such as NM_015658.2. Is there any way that
> we can find out the versioning of each mRNA?
>
>
>
> Thanks for your time,
>
> Phoenix Kwan
>
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