[Genome] wrong genomic sequence for mse SRPK1

Heather Trumbower heather at soe.ucsc.edu
Mon Jan 8 09:47:48 PST 2007


Kelly:

If you are using the genome browser for the human assembly with the "Other 
RefGene" track displayed, the genome sequence will in fact be the human 
sequence.

You can find mouse SRPK1 at chr17:28,317,181-28,350,043 in the browser for 
the latest mouse assembly.

I hope this helps, let us know if you have further questions.

Heather Trumbower
UCSC Genome Bioinformatics Group


On Sun, 7 Jan 2007, Kelly Hinkle wrote:

> Hello,
>
> I was using your sequence to find exon boundaries when I discovered that
> your mouse SRPK1 sequence( NM_016795) is actually the human sequence(
> NM_003137)...I wrote to you before about another gene FBXL2 also being
> incorrect. Is this something I am doing incorrectly, because I am pretty
> sure i am doing it correctly....if you see the link which cleary says mouse
> and the number, then scroll down to genomic sequence, the seq is
> human...here is the link to the page i am using:
>
> http://genome.ucsc.edu/cgi-bin/hgc?hgsid=83939078&o=35910569&t=35996851&
> g=xenoRefGene&i=NM_016795&c=chr6&l=35 910569&r=35996851&db=hg18&pix=620
>
> If you could let me know if/when this gets resolved that would be great
>
> Thanks,
> Kelly Hinkle
> hinkle.kelly at gmail.com
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