[Genome] altsplicing conserved graphs
Brooke Rhead
rhead at soe.ucsc.edu
Thu Jan 4 14:23:40 PST 2007
Hello P,
We do not store the alt-splicing images; they are drawn as needed by the
Genome Browser from the data in the table.
If you would like to recreate the alt-splicing images yourself, our
programs are available freely for academic, nonprofit, and personal use:
http://genome.ucsc.edu/FAQ/FAQdownloads#download27
If you are interested in doing this, one of our developers suggests
looking at doAltGraphXDetails() in kent/src/hg/hgc/hgc.c to get started.
I hope this information is helpful. Please contact us again if you have
further questions.
--
Brooke Rhead
UCSC Genome Bioinformatics Group
shepardp at uci.edu wrote:
> Hello UCSC folks,
>
> I am trying to download in bulk from your table browser the following data;
>
> Human splicing graphs conserved in the mouse transcriptome.
>
> I can get the altGraphX (location of splicing events in the human genome)
> but I do not know how to proceed after this?
>
> Thanks.
>
> P
>
>
>
>
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