February 2007 Archives by subject
Starting: Thu Feb 1 12:15:45 PST 2007
Ending: Wed Feb 28 21:56:41 PST 2007
Messages: 218
- [Genome] (no subject)
Sinoula Apostolou
- [Genome] (no subject)
Ann Zweig
- [Genome] [Fwd: Session feature request]
Angie Hinrichs
- [Genome] [UCSC Genome Browser] Downloading raw conservation scores
Kayla Smith
- [Genome] [UCSC Genome Browser] Downloading raw conservation scores
ChangHee Lee
- [Genome] A question about UCSC genome brower
liaojy
- [Genome] A question about UCSC genome brower
Fan Hsu
- [Genome] accession number error
Adrienne Hilton
- [Genome] accession number error
Robert Kuhn
- [Genome] addition hg18 chr3
Jeltje van Baren
- [Genome] Automatically blast and annotation tools available?
Brooke Rhead
- [Genome] BLAT hits overlaps
Yuval Itan
- [Genome] BLAT hits overlaps
Galt Barber
- [Genome] BLAT match, score, percentage - how to select best alignment
Anton Kratz
- [Genome] BLAT match, score, percentage - how to select best alignment
Anton Kratz
- [Genome] Blat on Configure screen
Michel Weber
- [Genome] Blat on Configure screen
Kayla Smith
- [Genome] BLAT questions
Susan Strome
- [Genome] BLAT questions
Kayla Smith
- [Genome] briggsae annotation
tw233 at bath.ac.uk
- [Genome] briggsae annotation
Ann Zweig
- [Genome] Btau3 liftover file
Wes Barris
- [Genome] Btau3 liftover file
Kayla Smith
- [Genome] C.elegans genome
Guenter Albrecht-Buehler
- [Genome] C.elegans genome
Hiram Clawson
- [Genome] Can I get percent identities or similar scores from the conservation plots?
Klebig, Mitchell L. Ph.D.
- [Genome] Can I get percent identities or similar scores from the conservation plots?
Brooke Rhead
- [Genome] chimp allele of human sequence position
Ding, Yan
- [Genome] chimp allele of human sequence position
Kayla Smith
- [Genome] Chimp sequence in the vertebrate multiz alignment track
Michael Hiller
- [Genome] Chimp sequence in the vertebrate multiz alignment track
Rachel Harte
- [Genome] Chimp sequence in the vertebrate multiz alignment track
Hiram Clawson
- [Genome] compiling ucsc genome browser on mac os x
Gerald Quon
- [Genome] compiling ucsc genome browser on mac os x
Davide Cittaro
- [Genome] compiling ucsc genome browser on mac os x
Hiram Clawson
- [Genome] congratulations - nice job on genome graphs
Ross Lazarus
- [Genome] congratulations - nice job on genome graphs
Ann Zweig
- [Genome] congratulations - nice job on genome graphs
Ross Lazarus
- [Genome] Conservation scores
Goel, Manisha
- [Genome] Conservation scores
Ann Zweig
- [Genome] conservation tracks for peptide sequences
richard
- [Genome] conservation tracks for peptide sequences
Brooke Rhead
- [Genome] CpG island numbering system
Arthur, Gerald L
- [Genome] CpG island numbering system
Brooke Rhead
- [Genome] custom track
Buckley, Noel
- [Genome] custom track
Hiram Clawson
- [Genome] D.erecta chromosome annotation
Jun Wang
- [Genome] D.erecta chromosome annotation
Robert Kuhn
- [Genome] Data download
Lee, Jason Thanh
- [Genome] Data download
Brooke Rhead
- [Genome] decode identifiers on genome graphs
Stanescu, Horia (NIH/NHGRI) [F]
- [Genome] decode identifiers on genome graphs
Ann Zweig
- [Genome] Does MAF format for multiz17way with ref hg18 not have "i" or "e" lines?
Andrew Smith
- [Genome] Does MAF format for multiz17way with ref hg18 not have "i" or "e" lines?
Ann Zweig
- [Genome] download GNF expression data
Bogdan Tanasa
- [Genome] download GNF expression data
Brooke Rhead
- [Genome] Downloading annotations for parts of genome
Goel, Manisha
- [Genome] Downloading annotations for parts of genome
Kayla Smith
- [Genome] Downloading genome data
Martin Werber
- [Genome] Downloading genome data
Hiram Clawson
- [Genome] Downloading specific sequence region
Gerard Manning
- [Genome] Downloading specific sequence region
Brooke Rhead
- [Genome] Downloading triCas2 genome assembly
Brooke Rhead
- [Genome] elliotsEncode.mod for running phastCons
Marek Szubert
- [Genome] elliotsEncode.mod for running phastCons
Kate Rosenbloom
- [Genome] exon information
Jiyuan An
- [Genome] exon information
Brooke Rhead
- [Genome] Exon Track?
JIMMY LIN
- [Genome] Exon Track?
JIMMY LIN
- [Genome] exons and a number of adjacent basepairs
Lingaas Frode
- [Genome] exons and a number of adjacent basepairs
Brooke Rhead
- [Genome] Expression for human genes
Isabelle Dupanloup
- [Genome] Expression for human genes
Kayla Smith
- [Genome] Extract exon sequences
Liu, Qing-Rong (NIH/NIDA/IRP) [E]
- [Genome] Extract exon sequences
Brooke Rhead
- [Genome] Extracting corresponding genomic location sequence from other genomes
Goel, Manisha
- [Genome] Extracting corresponding genomic location sequence from other genomes
Ann Zweig
- [Genome] feature request - save track settings ..
Benjamin Berman
- [Genome] feature request - save track settings ..
Ann Zweig
- [Genome] feature request - save track settings ..
Robert Kuhn
- [Genome] Find Homolog Genes based on MAF alignments
rw24 at duke.edu
- [Genome] Firefox problems with Table Browser
christopher.x.moy at gsk.com
- [Genome] Firefox problems with Table Browser
Kayla Smith
- [Genome] FISH probes from BAC clones
BIJU JOSEPH
- [Genome] flanking sequences
Smita Varia
- [Genome] flanking sequences
Kayla Smith
- [Genome] gene retrivel
Romena Qazi
- [Genome] gene retrivel
Hiram Clawson
- [Genome] Genome Browser query
Jaimie Sixsmith
- [Genome] Genome Browser query
Kayla Smith
- [Genome] Genome Graph/Affymetrix 500k Gene Chip data
Benbow, Lawrence
- [Genome] Genome Graphs
Patrick Sullivan
- [Genome] Genome Graphs
Jim Kent
- [Genome] GFF files
Vanessa Bauer
- [Genome] Hapmap data for hg18?
Benjamin Berman
- [Genome] Hapmap data for hg18?
Heather Trumbower
- [Genome] Hello UCSC Genome browser staff
ארז ליבנה
- [Genome] Hello UCSC Genome browser staff
Brooke Rhead
- [Genome] Hello UCSC Genome browser staff
Hiram Clawson
- [Genome] hg18 chr3 strange characters
Jeltje van Baren
- [Genome] hg18 chr3 strange characters
Kayla Smith
- [Genome] hg18 fasta files
Nate Miller
- [Genome] hg18 fasta files
Kayla Smith
- [Genome] How can I find out the citation for a table/track?
Steve Ladunga
- [Genome] How can I find out the citation for a table/track?
Brooke Rhead
- [Genome] including single quotes in track descriptions
Nina Thiessen
- [Genome] including single quotes in track descriptions
Hiram Clawson
- [Genome] Incorrectly annotated link
Michael A. Cahill
- [Genome] Incorrectly annotated link
Mike Mitchell
- [Genome] Incorrectly annotated link
Fan Hsu
- [Genome] Intersecting tracks from command line
Babak, Tomas
- [Genome] Intersecting tracks from command line
Hiram Clawson
- [Genome] Large query permissions
Vince Schulz
- [Genome] Large query permissions
Kayla Smith
- [Genome] Liftover from HG17 to HG18
Hairong Wei
- [Genome] Liftover from HG17 to HG18
Kayla Smith
- [Genome] linking to ucsc genome browser
Krishna Palaniappan
- [Genome] linking to ucsc genome browser
Brooke Rhead
- [Genome] local tool to extract region from wiggle format
Stein Aerts
- [Genome] local tool to extract region from wiggle format
Hiram Clawson
- [Genome] looking for human insulin gene
Bhattacharyya, Nisan (NIH/NIDDK) [E]
- [Genome] looking for human insulin gene
Archana Thakkapallayil
- [Genome] metylationstatus of cpG-islands
asli_ay at gmx.de
- [Genome] metylationstatus of cpG-islands
Kayla Smith
- [Genome] Moving tracks
David McGaughey
- [Genome] MSI for the attention of Kayla Smith
BIJU JOSEPH
- [Genome] MSI markers
BIJU JOSEPH
- [Genome] MSI markers
Kayla Smith
- [Genome] MySQL access to genome browser question
Michael P. Cary
- [Genome] MySQL access to genome browser question
Hiram Clawson
- [Genome] Nib-files for the mm8 assembly
Örjan Åkerborg
- [Genome] Nib-files for the mm8 assembly
Ann Zweig
- [Genome] Nib-files for the mm8 assembly
Ann Zweig
- [Genome] Overlap between refSeq, known_gene and all_mRNA tables
Alessandro Guffanti
- [Genome] Overlap between refSeq, known_gene and all_mRNA tables
Kayla Smith
- [Genome] Permission Request (ASAP)
Naomi ITOH
- [Genome] Permission Request (ASAP)
Brooke Rhead
- [Genome] Permission Request (ASAP)
Brooke Rhead
- [Genome] please help
Andy McCallion
- [Genome] possible reasons for sequence masking
Vanessa Bauer
- [Genome] possible reasons for sequence masking
Kayla Smith
- [Genome] potential discrepancy between genome browser and hg18.mm8.all.chain
Yiming Zhou
- [Genome] psl score calculation
Yuval Itan
- [Genome] psl score calculation
Galt Barber
- [Genome] Query: Restriction enzyme digest displays
Dillon Leong
- [Genome] Query: Restriction enzyme digest displays
Kayla Smith
- [Genome] Question about In-Silico PCR program
Wang, Jianmin
- [Genome] Question about In-Silico PCR program
Brooke Rhead
- [Genome] Question about intersecting two BED files
Stein Aerts
- [Genome] Question about intersecting two BED files
Mark Diekhans
- [Genome] question about SNP data in UCSC
Rory JOHNSON
- [Genome] question about SNP data in UCSC
Heather Trumbower
- [Genome] Question about SNPs that map to 2 genomic locations
McHenry, Toby Helen
- [Genome] Question about SNPs that map to 2 genomic locations
Heather Trumbower
- [Genome] Question RE: gene sorter
Dominick Sinicropi
- [Genome] Question RE: gene sorter
Galt Barber
- [Genome] Question regarding UTR sequences in Mouse Genome
Shah, Ruchir
- [Genome] Question regarding UTR sequences in Mouse Genome
Archana Thakkapallayil
- [Genome] Question regarding UTR sequences in Mouse Genome
Shah, Ruchir
- [Genome] Question regarding UTR sequences in Mouse Genome
archanat at soe.ucsc.edu
- [Genome] Question regarding UTR sequences in Mouse Genome
archanat at soe.ucsc.edu
- [Genome] Questions
Hailong.Meng.contractor at pmusa.com
- [Genome] Questions
Kayla Smith
- [Genome] Questions on update, dumps and SNPs of hg18 data subsets ---knownGene*, refGene* and SNP
Fangcheng Gong
- [Genome] Questions on update, dumps and SNPs of hg18 data subsets ---knownGene*, refGene* and SNP
Heather Trumbower
- [Genome] Questions on update, dumps and SNPs of hg18 data subsets ---knownGene*, refGene* and SNP
Fangcheng Gong
- [Genome] Questions on update, dumps and SNPs of hg18 data subsets ---knownGene*, refGene* and SNP
Heather Trumbower
- [Genome] Questions on update, dumps and SNPs of hg18 data subsets ---knownGene*, refGene* and SNP
Fangcheng Gong
- [Genome] Questions on update, dumps and SNPs of hg18 data subsets ---knownGene*, refGene* and SNP
Brooke Rhead
- [Genome] Questions on update, dumps and SNPs of hg18 data subsets ---knownGene*, refGene* and SNP
Brooke Rhead
- [Genome] Questions on update, dumps and SNPs of hg18 data subsets ---knownGene*, refGene* and SNP
Fangcheng Gong
- [Genome] Questions on update, dumps and SNPs of hg18 data subsets ---knownGene*, refGene* and SNP
Brooke Rhead
- [Genome] Questions on update, dumps and SNPs of hg18 data subsets ---knownGene*, refGene* and SNP
Fangcheng Gong
- [Genome] Recombination rate and exon conservation
Isabelle Dupanloup
- [Genome] Recombination rate and exon conservation
Heather Trumbower
- [Genome] Refseq
Paz Polak
- [Genome] Refseq
Archana Thakkapallayil
- [Genome] refseq filter
Jeltje van Baren
- [Genome] refseq filter
Brooke Rhead
- [Genome] repStart, repEnd, repLeft in chrN_rmsk table
Kayla Smith
- [Genome] RN4ToRN3 liftover file
msuder at MCB.McGill.CA
- [Genome] RN4ToRN3 liftover file
Brooke Rhead
- [Genome] RN4ToRN3 liftover file
Ann Zweig
- [Genome] RN4ToRN3 liftover file
Matthew Suderman
- [Genome] Session feature request
Tim Hefferon
- [Genome] Session feature request
Brooke Rhead
- [Genome] Singapore PETs
Alexieva-Botcheva, Krassimira
- [Genome] Singapore PETs
Kate Rosenbloom
- [Genome] SQL query hg17
Andrew Eckert
- [Genome] SQL query hg17
Brooke Rhead
- [Genome] Strand inconsistency in Drosophila flybase genes
Anton Nekrutenko
- [Genome] Strand inconsistency in Drosophila flybase genes
Kayla Smith
- [Genome] technical question on "&hgt.customText="
Mike Gilchrist
- [Genome] technical question on "&hgt.customText="
Kate Rosenbloom
- [Genome] TFBS conserved in mouse sequences
Mali Salmon-Divon
- [Genome] TFBS conserved in mouse sequences
Brooke Rhead
- [Genome] The method of conserved TFBS prediction
Jim (Chun-Chi Liu)
- [Genome] The method of conserved TFBS prediction
Matt Weirauch
- [Genome] The problem in the results of BLAT linux v34
wang xiaosong
- [Genome] The problem in the results of BLAT linux v34
Galt Barber
- [Genome] The problem in the results of BLAT linux v34
wang xiaosong
- [Genome] The problem in the results of BLAT linux v34
Galt Barber
- [Genome] The problem in the results of BLAT linux v34
wang xiaosong
- [Genome] The problem in the results of BLAT linux v34
Galt Barber
- [Genome] To get a whole set of alignments given the gene name
rw24 at duke.edu
- [Genome] To get a whole set of alignments given the gene name
rw24 at duke.edu
- [Genome] To get a whole set of alignments given the gene name
Brooke Rhead
- [Genome] Track control in creating links to the UCSC genome browser
Hiram Clawson
- [Genome] Track control in creating links to the UCSC genome browser
Sanghyuk Lee
- [Genome] Transcription Factors Binding sites
Pablo Minguez
- [Genome] Transcription Factors Binding sites
Ann Zweig
- [Genome] Transcription Factors Binding sites
Matt Weirauch
- [Genome] underlay
Tim Hefferon
- [Genome] underlay
Brooke Rhead
- [Genome] Upload a coordinate file to retrieve the seq
Khan, Sohail
- [Genome] Upload a coordinate file to retrieve the seq
Brooke Rhead
- [Genome] WSU cell line
Hilda Ye
- [Genome] WSU cell line
Kayla Smith
Last message date:
Wed Feb 28 21:56:41 PST 2007
Archived on: Wed Feb 28 23:06:20 PST 2007
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