February 2007 Archives by subject

• Messages sorted by: [ thread ] [ author ] [ date ]
• More info on this list...

Starting: Thu Feb 1 12:15:45 PST 2007
Ending: Wed Feb 28 21:56:41 PST 2007
Messages: 218

• [Genome] (no subject)   Sinoula Apostolou
• [Genome] (no subject)   Ann Zweig
• [Genome] [Fwd: Session feature request]   Angie Hinrichs
• [Genome] [UCSC Genome Browser] Downloading raw conservation scores   Kayla Smith
• [Genome] [UCSC Genome Browser] Downloading raw conservation scores   ChangHee Lee
• [Genome] A question about UCSC genome brower   liaojy
• [Genome] A question about UCSC genome brower   Fan Hsu
• [Genome] accession number error   Adrienne Hilton
• [Genome] accession number error   Robert Kuhn
• [Genome] addition hg18 chr3   Jeltje van Baren
• [Genome] Automatically blast and annotation tools available?   Brooke Rhead
• [Genome] BLAT hits overlaps   Yuval Itan
• [Genome] BLAT hits overlaps   Galt Barber
• [Genome] BLAT match, score, percentage - how to select best alignment   Anton Kratz
• [Genome] BLAT match, score, percentage - how to select best alignment   Anton Kratz
• [Genome] Blat on Configure screen   Michel Weber
• [Genome] Blat on Configure screen   Kayla Smith
• [Genome] BLAT questions   Susan Strome
• [Genome] BLAT questions   Kayla Smith
• [Genome] briggsae annotation   tw233 at bath.ac.uk
• [Genome] briggsae annotation   Ann Zweig
• [Genome] Btau3 liftover file   Wes Barris
• [Genome] Btau3 liftover file   Kayla Smith
• [Genome] C.elegans genome   Guenter Albrecht-Buehler
• [Genome] C.elegans genome   Hiram Clawson
• [Genome] Can I get percent identities or similar scores from the conservation plots?   Klebig, Mitchell L. Ph.D.
• [Genome] Can I get percent identities or similar scores from the conservation plots?   Brooke Rhead
• [Genome] chimp allele of human sequence position   Ding, Yan
• [Genome] chimp allele of human sequence position   Kayla Smith
• [Genome] Chimp sequence in the vertebrate multiz alignment track   Michael Hiller
• [Genome] Chimp sequence in the vertebrate multiz alignment track   Rachel Harte
• [Genome] Chimp sequence in the vertebrate multiz alignment track   Hiram Clawson
• [Genome] compiling ucsc genome browser on mac os x   Gerald Quon
• [Genome] compiling ucsc genome browser on mac os x   Davide Cittaro
• [Genome] compiling ucsc genome browser on mac os x   Hiram Clawson
• [Genome] congratulations - nice job on genome graphs   Ross Lazarus
• [Genome] congratulations - nice job on genome graphs   Ann Zweig
• [Genome] congratulations - nice job on genome graphs   Ross Lazarus
• [Genome] Conservation scores   Goel, Manisha
• [Genome] Conservation scores   Ann Zweig
• [Genome] conservation tracks for peptide sequences   richard
• [Genome] conservation tracks for peptide sequences   Brooke Rhead
• [Genome] CpG island numbering system   Arthur, Gerald L
• [Genome] CpG island numbering system   Brooke Rhead
• [Genome] custom track   Buckley, Noel
• [Genome] custom track   Hiram Clawson
• [Genome] D.erecta chromosome annotation   Jun Wang
• [Genome] D.erecta chromosome annotation   Robert Kuhn
• [Genome] Data download   Lee, Jason Thanh
• [Genome] Data download   Brooke Rhead
• [Genome] decode identifiers on genome graphs   Stanescu, Horia (NIH/NHGRI) [F]
• [Genome] decode identifiers on genome graphs   Ann Zweig
• [Genome] Does MAF format for multiz17way with ref hg18 not have "i" or "e" lines?   Andrew Smith
• [Genome] Does MAF format for multiz17way with ref hg18 not have "i" or "e" lines?   Ann Zweig
• [Genome] download GNF expression data   Bogdan Tanasa
• [Genome] download GNF expression data   Brooke Rhead
• [Genome] Downloading annotations for parts of genome   Goel, Manisha
• [Genome] Downloading annotations for parts of genome   Kayla Smith
• [Genome] Downloading genome data   Martin Werber
• [Genome] Downloading genome data   Hiram Clawson
• [Genome] Downloading specific sequence region   Gerard Manning
• [Genome] Downloading specific sequence region   Brooke Rhead
• [Genome] Downloading triCas2 genome assembly   Brooke Rhead
• [Genome] elliotsEncode.mod for running phastCons   Marek Szubert
• [Genome] elliotsEncode.mod for running phastCons   Kate Rosenbloom
• [Genome] exon information   Jiyuan An
• [Genome] exon information   Brooke Rhead
• [Genome] Exon Track?   JIMMY LIN
• [Genome] Exon Track?   JIMMY LIN
• [Genome] exons and a number of adjacent basepairs   Lingaas Frode
• [Genome] exons and a number of adjacent basepairs   Brooke Rhead
• [Genome] Expression for human genes   Isabelle Dupanloup
• [Genome] Expression for human genes   Kayla Smith
• [Genome] Extract exon sequences   Liu, Qing-Rong (NIH/NIDA/IRP) [E]
• [Genome] Extract exon sequences   Brooke Rhead
• [Genome] Extracting corresponding genomic location sequence from other genomes   Goel, Manisha
• [Genome] Extracting corresponding genomic location sequence from other genomes   Ann Zweig
• [Genome] feature request - save track settings ..   Benjamin Berman
• [Genome] feature request - save track settings ..   Ann Zweig
• [Genome] feature request - save track settings ..   Robert Kuhn
• [Genome] Find Homolog Genes based on MAF alignments   rw24 at duke.edu
• [Genome] Firefox problems with Table Browser   christopher.x.moy at gsk.com
• [Genome] Firefox problems with Table Browser   Kayla Smith
• [Genome] FISH probes from BAC clones   BIJU JOSEPH
• [Genome] flanking sequences   Smita Varia
• [Genome] flanking sequences   Kayla Smith
• [Genome] gene retrivel   Romena Qazi
• [Genome] gene retrivel   Hiram Clawson
• [Genome] Genome Browser query   Jaimie Sixsmith
• [Genome] Genome Browser query   Kayla Smith
• [Genome] Genome Graph/Affymetrix 500k Gene Chip data   Benbow, Lawrence
• [Genome] Genome Graphs   Patrick Sullivan
• [Genome] Genome Graphs   Jim Kent
• [Genome] GFF files   Vanessa Bauer
• [Genome] Hapmap data for hg18?   Benjamin Berman
• [Genome] Hapmap data for hg18?   Heather Trumbower
• [Genome] Hello UCSC Genome browser staff   ארז ליבנה
• [Genome] Hello UCSC Genome browser staff   Brooke Rhead
• [Genome] Hello UCSC Genome browser staff   Hiram Clawson
• [Genome] hg18 chr3 strange characters   Jeltje van Baren
• [Genome] hg18 chr3 strange characters   Kayla Smith
• [Genome] hg18 fasta files   Nate Miller
• [Genome] hg18 fasta files   Kayla Smith
• [Genome] How can I find out the citation for a table/track?   Steve Ladunga
• [Genome] How can I find out the citation for a table/track?   Brooke Rhead
• [Genome] including single quotes in track descriptions   Nina Thiessen
• [Genome] including single quotes in track descriptions   Hiram Clawson
• [Genome] Incorrectly annotated link   Michael A. Cahill
• [Genome] Incorrectly annotated link   Mike Mitchell
• [Genome] Incorrectly annotated link   Fan Hsu
• [Genome] Intersecting tracks from command line   Babak, Tomas
• [Genome] Intersecting tracks from command line   Hiram Clawson
• [Genome] Large query permissions   Vince Schulz
• [Genome] Large query permissions   Kayla Smith
• [Genome] Liftover from HG17 to HG18   Hairong Wei
• [Genome] Liftover from HG17 to HG18   Kayla Smith
• [Genome] linking to ucsc genome browser   Krishna Palaniappan
• [Genome] linking to ucsc genome browser   Brooke Rhead
• [Genome] local tool to extract region from wiggle format   Stein Aerts
• [Genome] local tool to extract region from wiggle format   Hiram Clawson
• [Genome] looking for human insulin gene   Bhattacharyya, Nisan (NIH/NIDDK) [E]
• [Genome] looking for human insulin gene   Archana Thakkapallayil
• [Genome] metylationstatus of cpG-islands   asli_ay at gmx.de
• [Genome] metylationstatus of cpG-islands   Kayla Smith
• [Genome] Moving tracks   David McGaughey
• [Genome] MSI for the attention of Kayla Smith   BIJU JOSEPH
• [Genome] MSI markers   BIJU JOSEPH
• [Genome] MSI markers   Kayla Smith
• [Genome] MySQL access to genome browser question   Michael P. Cary
• [Genome] MySQL access to genome browser question   Hiram Clawson
• [Genome] Nib-files for the mm8 assembly   Örjan Åkerborg
• [Genome] Nib-files for the mm8 assembly   Ann Zweig
• [Genome] Nib-files for the mm8 assembly   Ann Zweig
• [Genome] Overlap between refSeq, known_gene and all_mRNA tables   Alessandro Guffanti
• [Genome] Overlap between refSeq, known_gene and all_mRNA tables   Kayla Smith
• [Genome] Permission Request (ASAP)   Naomi ITOH
• [Genome] Permission Request (ASAP)   Brooke Rhead
• [Genome] Permission Request (ASAP)   Brooke Rhead
• [Genome] please help   Andy McCallion
• [Genome] possible reasons for sequence masking   Vanessa Bauer
• [Genome] possible reasons for sequence masking   Kayla Smith
• [Genome] potential discrepancy between genome browser and hg18.mm8.all.chain   Yiming Zhou
• [Genome] psl score calculation   Yuval Itan
• [Genome] psl score calculation   Galt Barber
• [Genome] Query: Restriction enzyme digest displays   Dillon Leong
• [Genome] Query: Restriction enzyme digest displays   Kayla Smith
• [Genome] Question about In-Silico PCR program   Wang, Jianmin
• [Genome] Question about In-Silico PCR program   Brooke Rhead
• [Genome] Question about intersecting two BED files   Stein Aerts
• [Genome] Question about intersecting two BED files   Mark Diekhans
• [Genome] question about SNP data in UCSC   Rory JOHNSON
• [Genome] question about SNP data in UCSC   Heather Trumbower
• [Genome] Question about SNPs that map to 2 genomic locations   McHenry, Toby Helen
• [Genome] Question about SNPs that map to 2 genomic locations   Heather Trumbower
• [Genome] Question RE: gene sorter   Dominick Sinicropi
• [Genome] Question RE: gene sorter   Galt Barber
• [Genome] Question regarding UTR sequences in Mouse Genome   Shah, Ruchir
• [Genome] Question regarding UTR sequences in Mouse Genome   Archana Thakkapallayil
• [Genome] Question regarding UTR sequences in Mouse Genome   Shah, Ruchir
• [Genome] Question regarding UTR sequences in Mouse Genome   archanat at soe.ucsc.edu
• [Genome] Question regarding UTR sequences in Mouse Genome   archanat at soe.ucsc.edu
• [Genome] Questions   Hailong.Meng.contractor at pmusa.com
• [Genome] Questions   Kayla Smith
• [Genome] Questions on update, dumps and SNPs of hg18 data subsets ---knownGene*, refGene* and SNP   Fangcheng Gong
• [Genome] Questions on update, dumps and SNPs of hg18 data subsets ---knownGene*, refGene* and SNP   Heather Trumbower
• [Genome] Questions on update, dumps and SNPs of hg18 data subsets ---knownGene*, refGene* and SNP   Fangcheng Gong
• [Genome] Questions on update, dumps and SNPs of hg18 data subsets ---knownGene*, refGene* and SNP   Heather Trumbower
• [Genome] Questions on update, dumps and SNPs of hg18 data subsets ---knownGene*, refGene* and SNP   Fangcheng Gong
• [Genome] Questions on update, dumps and SNPs of hg18 data subsets ---knownGene*, refGene* and SNP   Brooke Rhead
• [Genome] Questions on update, dumps and SNPs of hg18 data subsets ---knownGene*, refGene* and SNP   Brooke Rhead
• [Genome] Questions on update, dumps and SNPs of hg18 data subsets ---knownGene*, refGene* and SNP   Fangcheng Gong
• [Genome] Questions on update, dumps and SNPs of hg18 data subsets ---knownGene*, refGene* and SNP   Brooke Rhead
• [Genome] Questions on update, dumps and SNPs of hg18 data subsets ---knownGene*, refGene* and SNP   Fangcheng Gong
• [Genome] Recombination rate and exon conservation   Isabelle Dupanloup
• [Genome] Recombination rate and exon conservation   Heather Trumbower
• [Genome] Refseq   Paz Polak
• [Genome] Refseq   Archana Thakkapallayil
• [Genome] refseq filter   Jeltje van Baren
• [Genome] refseq filter   Brooke Rhead
• [Genome] repStart, repEnd, repLeft in chrN_rmsk table   Kayla Smith
• [Genome] RN4ToRN3 liftover file   msuder at MCB.McGill.CA
• [Genome] RN4ToRN3 liftover file   Brooke Rhead
• [Genome] RN4ToRN3 liftover file   Ann Zweig
• [Genome] RN4ToRN3 liftover file   Matthew Suderman
• [Genome] Session feature request   Tim Hefferon
• [Genome] Session feature request   Brooke Rhead
• [Genome] Singapore PETs   Alexieva-Botcheva, Krassimira
• [Genome] Singapore PETs   Kate Rosenbloom
• [Genome] SQL query hg17   Andrew Eckert
• [Genome] SQL query hg17   Brooke Rhead
• [Genome] Strand inconsistency in Drosophila flybase genes   Anton Nekrutenko
• [Genome] Strand inconsistency in Drosophila flybase genes   Kayla Smith
• [Genome] technical question on "&hgt.customText="   Mike Gilchrist
• [Genome] technical question on "&hgt.customText="   Kate Rosenbloom
• [Genome] TFBS conserved in mouse sequences   Mali Salmon-Divon
• [Genome] TFBS conserved in mouse sequences   Brooke Rhead
• [Genome] The method of conserved TFBS prediction   Jim (Chun-Chi Liu)
• [Genome] The method of conserved TFBS prediction   Matt Weirauch
• [Genome] The problem in the results of BLAT linux v34   wang xiaosong
• [Genome] The problem in the results of BLAT linux v34   Galt Barber
• [Genome] The problem in the results of BLAT linux v34   wang xiaosong
• [Genome] The problem in the results of BLAT linux v34   Galt Barber
• [Genome] The problem in the results of BLAT linux v34   wang xiaosong
• [Genome] The problem in the results of BLAT linux v34   Galt Barber
• [Genome] To get a whole set of alignments given the gene name   rw24 at duke.edu
• [Genome] To get a whole set of alignments given the gene name   rw24 at duke.edu
• [Genome] To get a whole set of alignments given the gene name   Brooke Rhead
• [Genome] Track control in creating links to the UCSC genome browser   Hiram Clawson
• [Genome] Track control in creating links to the UCSC genome browser   Sanghyuk Lee
• [Genome] Transcription Factors Binding sites   Pablo Minguez
• [Genome] Transcription Factors Binding sites   Ann Zweig
• [Genome] Transcription Factors Binding sites   Matt Weirauch
• [Genome] underlay   Tim Hefferon
• [Genome] underlay   Brooke Rhead
• [Genome] Upload a coordinate file to retrieve the seq   Khan, Sohail
• [Genome] Upload a coordinate file to retrieve the seq   Brooke Rhead
• [Genome] WSU cell line   Hilda Ye
• [Genome] WSU cell line   Kayla Smith

Last message date: Wed Feb 28 21:56:41 PST 2007
Archived on: Wed Feb 28 23:06:20 PST 2007

• Messages sorted by: [ thread ] [ author ] [ date ]
• More info on this list...