[Genome] BLAT hits overlaps

[Yuval Itan]

Hello,

I'm looking for whole gene duplications in human- hits that don't  
overlap. I was wondering if you would consider the following two BLAT  
hits as a duplication- their start and end location seem to overlap,  
but they are on opposite strands- does it matter in that case?

match   mis-    rep.    N's     Q gap   Q gap   T gap   T gap   strand   
Q               Q       Q       Q       T               T       T        
T       block   blockSizes      qStarts  tStarts

1623	0	0	0	0	0	6	6079	+	H_v41_ENSP00000272395	1	1623	0	1623	2	242951149 
	95621492	95629194	7	132,415,96,231,23,98,628,	 
0,132,547,643,874,897,995,	 
95621492,95623494,95624524,95625676,95626803,95627354,95628566,		
1614	9	0	0	0	0	7	6098	-	H_v41_ENSP00000272395	1	1623	0	1623	2	242951149 
	95506491	95514212	8	35,593,98,23,231,96,415,132,	 
0,35,628,726,749,980,1076,1491,	 
95506491,95506527,95508234,95508860,95509779,95511069,95511778,95514080,

Thanks a lot,

Yuval