[Genome] How can I find out the citation for a table/track?
Brooke Rhead
rhead at soe.ucsc.edu
Fri Feb 9 17:12:29 PST 2007
Hi Steve,
Each track has a description page associated with it, and most of them
have a references and/or credits section at the bottom. To see the
description, go to the Track Settings page, either by clicking on the
track name in the Genome Browser (the blue link directly above the
drop-down box that controls its visibility), or by clicking on the
"mini-button" for the track -- the tall gray or blue box at the far left
of the track when it is displayed in the Genome Browser.
Note that the table 'encodeUcsdChipRnapHct116' is a sub-track of the "LI
Ng gIF ChIP" track in the hg17 ENCODE Chromatin Immunoprecipitation
section. A lot of the ENCODE data is quite new and may not have been
published yet. See more about the ENCODE project here:
http://genome.ucsc.edu/ENCODE/
I hope this information is helpful. Please let us know if you have any
further questions.
--
Brooke Rhead
UCSC Genome Bioinformatics Group
Steve Ladunga wrote:
> Hello,
>
> Could you please help me to find out the citation (literature reference)
> for your tables/tracks?
>
> I found SOME info on:
>
> http://genome.ucsc.edu/google/goldenPath/help/trackDescriptions.html#T_tracks
> and
> http://genome.ucsc.edu/google/goldenPath/gbdDescriptions.html
>
> but for several tables finding the publication would take quite a bit of
> time, and you may have them already.
>
> do you have the references for hg17 tiling-array-related tables?
>
> For example, what is the reference for encode_UCSD_ChIP_RNAP_HCT116
>
> Thank you so much!
>
> Steve
>
> Steve Ladunga
> UNL Center for Biotechnology and
> Department of Statistics
> E204 Beadle Center, University of Nebraska-Lincoln
> 1901 Vine St., Lincoln, NE 68588-0665
> Phone: (402) 472-6074
> Fax: (402) 472-3139
> sladunga at unl.edu
> _______________________________________________
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