[Genome] Extract exon sequences

Brooke Rhead rhead at soe.ucsc.edu
Wed Feb 7 14:03:13 PST 2007


Hi Tim,

I assume you are referring to using the Table Browser to get DNA using 
the "output format: sequence" option.

If you enter a filename in the "output file:" box *before* hitting the 
"get output" button and setting the sequence retrieval and formatting 
options, the output should be saved to a file rather than displayed in 
your browser.

If this does not answer your question, or if I have misunderstood your 
question, please let us know.

--
Brooke Rhead
UCSC Genome Bioinformatics Group



Liu, Qing-Rong (NIH/NIDA/IRP) [E] wrote:
> Dear Sir,
>  
> How do I extract all the exon sequences from "get DNA" with extended
> case/color options without copy/paste?
>  
> Thanks,
>  
> 
> Qing-Rong (Tim) Liu, Ph.D.
> 
> Staff Scientist
> 
> Molecular Neurobiology Branch
> 
> NIDA/NIH
> 
> Suite 3510
> 
> Triad Building
> 
> 333 Cassell Drive
> 
> Baltimore, MD 21224
> 
> e-mail: qliu at intra.nida.nih.gov
> 
> Tel: (410) 550-2843 x 157
> 
> Fax: (410) 550-4-1535
> 
>  
> _______________________________________________
> Genome maillist  -  Genome at soe.ucsc.edu
> http://www.soe.ucsc.edu/mailman/listinfo/genome


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