[Genome] Downloading specific sequence region

Brooke Rhead rhead at soe.ucsc.edu
Fri Feb 2 18:51:27 PST 2007


Hello Gerard,

We do have an FAQ writeup on this one:

http://genome.ucsc.edu/FAQ/FAQdownloads#download32

Please let us know if you have any further questions.

--
Brooke Rhead
UCSC Genome Bioinformatics Group


Gerard Manning wrote:
> Hi,
> 	I have what I suspect is a very dumb question, but one that I  
> haven't been able to answer after several trawls though your website.  
> I'd like to be able to download the sequence from any region of any  
> genome that you publish, ideally by pasting in the co-ordinates in  
> the style used by the genome browser. I can find all kinds of areas  
> where I can use those co-ordinates to get rich annotations and data,  
> but not the raw sequence. My main use for the sequence is to run  
> homology-based gene predictions (genewise and the like) and to search  
> for remote regions of homology in the areas around partial gene  
> predictions.
> 
> 	My apologies if this is a FAQ, any help you can give would be very  
> much appreciated.
> 
> 		-Gerard Manning.
> 
> _______________________________________________
> Genome maillist  -  Genome at soe.ucsc.edu
> http://www.soe.ucsc.edu/mailman/listinfo/genome


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