December 2007 Archives by author

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Starting: Sun Dec 2 11:26:53 PST 2007
Ending: Mon Dec 31 23:16:33 PST 2007
Messages: 168

• [Genome] Mapping GenomeBrowser assembly names to official assembly names.   chris wilton (BI)
• [Genome] gene ontology information from UCSC table browser   Les Ander
• [Genome] (no subject)   Kathleen Askland
• [Genome] Refseq genes from UCSC   Barb, Jennifer (NIH/CIT) [E]
• [Genome] protein to dna blat / protein to genome blat alignment   Galt Barber
• [Genome] Couldn't make AF_INET socket   Galt Barber
• [Genome] cds table   Galt Barber
• [Genome] Preformatted GFF Downloads   Dr.Christopher Bauser
• [Genome] Annotation-confused   Ewan Birney
• [Genome] 28-way protein sequence alignment   Ewan Birney
• [Genome] download a small sequence from mouse build 33 (May 2004)   Gerald Bothe
• [Genome] Rat update and Cow dataset   Donovan Chan
• [Genome] Could it possible to have a custom track with the LD structure of our own data?   Pei-Lung Chen
• [Genome] non-human self alignments   Trees_Juen Chuang
• [Genome] phastCons17way database   Hiram Clawson
• [Genome] Repeatmasker *.align files for Human (hg18) and Mouse (mm8)Genomes   Hiram Clawson
• [Genome] size limit of BED files?   Hiram Clawson
• [Genome] Chimpanzee self alignments   Hiram Clawson
• [Genome] Question for a lower threshold for chain-score in the hg18 2006   Hiram Clawson
• [Genome] custom annotation error   Hiram Clawson
• [Genome] Possible WIG display bug?   Hiram Clawson
• [Genome] Inconsistent .over.chain's ?   Hiram Clawson
• [Genome] using MySQL   Hiram Clawson
• [Genome] Question on track display   Hiram Clawson
• [Genome] UCSC Genome Browser down time   Hiram Clawson
• [Genome] size limit of BED files?   Leighton J. Core
• [Genome] BAT2D1 protein   John Darlow
• [Genome] Chimp ESTs   Pufeng Du
• [Genome] UCSC question   GEORG EHRET
• [Genome] Chimpanzee self alignments   J.J. Emerson
• [Genome] Chimpanzee self alignments   J.J. Emerson
• [Genome] protein to dna blat / protein to genome blat alignment   Finney, Richard (NIH/NCI) [E]
• [Genome] Tracks showing recombination hotspots in the HapMap and Perlegen data sets   Frazer, Kelly A.
• [Genome] BLAT miRNA   Gao, Ge
• [Genome] UCE Custom Track   Gonzales, Patrick R.
• [Genome] UCE Custom Track   Gonzales, Patrick R.
• [Genome] Human Exon Coordinate List   Rajini Haraksingh
• [Genome] Repeatmasker *.align files for Human (hg18) and Mouse (mm8)Genomes   Angie Hinrichs
• [Genome] Repeatmasker *.align files for Human (hg18) and Mouse (mm8)Genomes   Angie Hinrichs
• [Genome] gff to flyBaseGene.txt   Angie Hinrichs
• [Genome] multiz 28 way   Bart Hooghe
• [Genome] Branch lengths of the Newick tree for 12 insect genome alignments   Shu-Ning Hsu
• [Genome] CpG islands and TSS   Ioschikhes, Ilya
• [Genome] Custom tracks at ucsc   Donna Karolchik
• [Genome] authorisation for presenting image   Donna Karolchik
• [Genome] CpG island sequences   Kramer, Robin S. (UMC-Student)
• [Genome] (no subject)   Kroll, Todd [BSD] - PTH
• [Genome] Possible WIG display bug?   Martin Krzywinski
• [Genome] Annotated transciption start sites   Robert Kuhn
• [Genome] Mapping GenomeBrowser assembly names to official assembly names.   Robert Kuhn
• [Genome] Mapping GenomeBrowser assembly names to official assembly names.   Robert Kuhn
• [Genome] Tracks showing recombination hotspots in the HapMap and Perlegen data sets   Robert Kuhn
• [Genome] Branch lengths of the Newick tree for 12 insect genome alignments   Robert Kuhn
• [Genome] (no subject)   Robert Kuhn
• [Genome] Unslpliced EST   Robert Kuhn
• [Genome] Inquiring about more efficient ways to access your data   Robert Kuhn
• [Genome] tfbsConsSites (sequences)   Vladimir Kuryshev
• [Genome] 28-way protein sequence alignment   Li, Leping (NIH/NIEHS) [E]
• [Genome] 28-way protein sequence alignment   Li, Leping (NIH/NIEHS) [E]
• [Genome] How to display only one specific isoform of a gene and hide others.   Liu, Zheng
• [Genome] SNP update   Ma, Jin
• [Genome] Snp schema   Ma, Jin
• [Genome] Question on track display   Ma, Jin
• [Genome] Annotation-confused   Chandrashekara Mallappa
• [Genome] <no subject>   Susan Mango
• [Genome] custom annotation error   Mark Meyer
• [Genome] Net Files in table browser   Emmanuel Mongin
• [Genome] the kgAlias table   Yuval Nevo
• [Genome] authorisation for presenting image   Jacques Normand
• [Genome] Accessing the right chained self alignment in hg18   Robert Olinski
• [Genome] Question for a lower threshold for chain-score in the hg18 2006   Robert Olinski
• [Genome] Question for a lower threshold for chain-score in the hg18 2006   Robert Olinski
• [Genome] data inconsistence from table browser and mysql server   Tao Peng
• [Genome] phastCons17way database   Jittima Piriyapongsa
• [Genome] [Fwd: question UCSC Tables]   Katleen De Preter
• [Genome] liftOver number of conversion   Domenico Raimondo
• [Genome] Chimpanzee self alignments   Brian Raney
• [Genome] non-human self alignments   Brian Raney
• [Genome] Chimpanzee self alignments   Brian Raney
• [Genome] Help!   Brooke Rhead
• [Genome] Rat update and Cow dataset   Brooke Rhead
• [Genome] Rat update and Cow dataset   Brooke Rhead
• [Genome] Question about repeat masker table   Brooke Rhead
• [Genome] (no subject)   Brooke Rhead
• [Genome] SNP update   Brooke Rhead
• [Genome] Wiggle track   Brooke Rhead
• [Genome] CpG islands and TSS   Brooke Rhead
• [Genome] Chimp ESTs   Brooke Rhead
• [Genome] Accessing the right chained self alignment in hg18   Brooke Rhead
• [Genome] Preformatted GFF Downloads   Brooke Rhead
• [Genome] question about ucsc genome browser?   Brooke Rhead
• [Genome] using MySQL   Brooke Rhead
• [Genome] Possible WIG display bug?   Gordon Robertson
• [Genome] Possible WIG display bug?   Gordon Robertson
• [Genome] Wiggle track   Peter Scacheri
• [Genome] Inquiring about more efficient ways to access your data   SiddarthGautham Selvaraj
• [Genome] mutually exclusive exons   Pete Shepard
• [Genome] BAC track   Shlomit
• [Genome] human chromosomes   Kayla Smith
• [Genome] Standardizing the heights of different tracks   Kayla Smith
• [Genome] question about double records in refseq database   Kayla Smith
• [Genome] download a small sequence from mouse build 33 (May 2004)   Kayla Smith
• [Genome] ID composition   Kayla Smith
• [Genome] download a small sequence from mouse build 33 (May 2004)   Kayla Smith
• [Genome] 28-way protein sequence alignment   Kayla Smith
• [Genome] gnf1m expression data   Kayla Smith
• [Genome] Snp schema   Kayla Smith
• [Genome] data inconsistence from table browser and mysql server   Kayla Smith
• [Genome] Net Files in table browser   Kayla Smith
• [Genome] LAMA2 exon 44   Kayla Smith
• [Genome] tfbsConsSites (sequences)   Kayla Smith
• [Genome] Refseq genes from UCSC   Kayla Smith
• [Genome] How to display only one specific isoform of a gene and hide others.   Kayla Smith
• [Genome] Genome Graphs   Samuel P. Strom
• [Genome] Query about knownGenes tables at http://hgdownload.cse.ucsc.edu/goldenPath/hg18/database/   Archana Thakkapallayil
• [Genome] question about Direct MySQL access to data   Archana Thakkapallayil
• [Genome] UCSC genome browser for User input GFF files   Archana Thakkapallayil
• [Genome] Rat chromosome Y?   Karen Thatcher
• [Genome] Human Genome Graphs Upload Fails   Nicki Tiffin
• [Genome] Unslpliced EST   Val Vas
• [Genome] Query about knownGenes tables at http://hgdownload.cse.ucsc.edu/goldenPath/hg18/database/   Viswanath, Lalitha (NIH/NCI) [C]
• [Genome] from EST to Gene   Xi Wang
• [Genome] The D. ananassae database lacks the wolbachia sequences   Joakim Westberg
• [Genome] LAMA2 exon 44   Tom Winder
• [Genome] gff to flyBaseGene.txt   Karen M. Wong
• [Genome] human chromosomes   Yan Xiang
• [Genome] Tandem repeats finder for rheMac2   Guojie Zhang
• [Genome] UCSC genome browser for User input GFF files   Rachel Zhang
• [Genome] Help!   ZhengWenXin
• [Genome] Inconsistent .over.chain's ?   Xueya Zhou
• [Genome] Inconsistent .over.chain's ?   Xueya Zhou
• [Genome] anything can I do with mm5 data?   Ann Zweig
• [Genome] BAT2D1 protein   Ann Zweig
• [Genome] mutually exclusive exons   Ann Zweig
• [Genome] what about the NM accession number of Chimpanzee   Ann Zweig
• [Genome] Human Genome Graphs Upload Fails   Ann Zweig
• [Genome] Repeatmasker *.align files for Human (hg18) and Mouse (mm8)Genomes   Ann Zweig
• [Genome] 28-way protein sequence alignment   Ann Zweig
• [Genome] liftOver number of conversion   Ann Zweig
• [Genome] UCE Custom Track   Ann Zweig
• [Genome] UCE Custom Track   Ann Zweig
• [Genome] [Fwd: question UCSC Tables]   Ann Zweig
• [Genome] Rat chromosome Y?   Ann Zweig
• [Genome] multiz 28 way   Ann Zweig
• [Genome] UCSC question   Ann Zweig
• [Genome] The D. ananassae database lacks the wolbachia sequences   Ann Zweig
• [Genome] from EST to Gene   Ann Zweig
• [Genome] Genome Graphs   Ann Zweig
• [Genome] multiz 28 way   Ann Zweig
• [Genome] <no subject>   Ann Zweig
• [Genome] Tandem repeats finder for rheMac2   Ann Zweig
• [Genome] Tandem repeats finder for rheMac2   Ann Zweig
• [Genome] Human Exon Coordinate List   Ann Zweig
• [Genome] cds table   Ann Zweig
• [Genome] Could it possible to have a custom track with the LD structure of our own data?   Ann Zweig
• [Genome] gene ontology information from UCSC table browser   Ann Zweig
• [Genome] CpG island sequences   Ann Zweig
• [Genome] Custom tracks at ucsc   bob stephens [contr]
• [Genome] gnf1m expression data   chris11 at helix.nih.gov
• [Genome] cds table   st kumer
• [Genome] using MySQL   st kumer
• [Genome] Repeatmasker *.align files for Human (hg18) and Mouse (mm8)Genomes   leongb
• [Genome] Question about repeat masker table   asaf levy
• [Genome] Couldn't make AF_INET socket   wenbing meng
• [Genome] ID composition   morales at mpi-cbg.de
• [Genome] question about Direct MySQL access to data   dromi nir
• [Genome] question about ucsc genome browser?   zxu
• [Genome] what about the NM accession number of Chimpanzee   侯磊

Last message date: Mon Dec 31 23:16:33 PST 2007
Archived on: Tue Jan 1 09:51:57 PST 2008

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