[Genome] Net Files in table browser

[Kayla Smith]

Hello Emmanuel,

Could you please send me some of the coordinates that are troubling you, 
and I'll take a look at them?

One thing to keep in mind is to check that you're looking at the correct 
assembly of chicken/human.  On the default human browser, hg18, the 
chicken net is for the galGal3 assembly.

You can also download files here:
http://hgdownload.cse.ucsc.edu/goldenPath/hg18/vsGalGal3/

I hope this information is helpful to you.  Please don't hesitate to 
contact us again if you require further assistance.

Kayla

Emmanuel Mongin wrote:
> Hi,
> 
> I tried to fetch net file in bed from the table browser (Chicken net  
> file in Human)  and the coordinates I retrieve seem to correspond to  
> the gaps and not the aligned regions. How can I get the aligned regions?
> 
> Thanks.
> 
> Emmanuel
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