[Genome] UCSC genome browser for User input GFF files

[Rachel Zhang]

Dear UCSC genome browser help,

Could you help suggest how to best display the user data in the GFF format?
The example is in the attached text file.

It contains the human chromosome #, the start # and end 3, and an
experimental value associated with that segment. All the strand is +.
The start and end # are estimated mapping from mouse genome to human genome
based on synteny mapping.

I tried the "Custom track"
http://genome.ucsc.edu/goldenPath/customTracks/custTracks.html, but I could
only get the graph with the segment, no experimental value can be displayed.


Would you be able to tell me if it is my gff format that is incorrect, or I
should use some other function to graph?

Thank you so much for your help!

With kind regards,
Rachel Zhang

Engineering Science Biomedical Option
University of Toronto
-------------- next part --------------
An embedded and charset-unspecified text was scrubbed...
Name: UCSC1121A.gff
Url: http://www.soe.ucsc.edu/pipermail/genome/attachments/20071204/2f1c211f/attachment-0001.pl