August 2007 Archives by subject

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Starting: Wed Aug 1 03:53:28 PDT 2007
Ending: Fri Aug 31 13:52:11 PDT 2007
Messages: 256

• [Genome] (no subject)   Shauna Kanel
• [Genome] (no subject)   Shauna Kanel
• [Genome] (no subject)   Archana Thakkapallayil
• [Genome] a question about dbSNP126 in genome browser and dbSNP127 at NCBI   wenzhong
• [Genome] a question about dbSNP126 in genome browser and dbSNP127 at NCBI   Brooke Rhead
• [Genome] A Question regarding the UCSC genome browser   Oren Ben-Ami
• [Genome] A Question regarding the UCSC genome browser   Hiram Clawson
• [Genome] A Question regarding the UCSC genome browser   Ewan Birney
• [Genome] about Blat software   Lan-hsin Wang
• [Genome] absent mRNA accession   ines mollet
• [Genome] absent mRNA accession   Archana Thakkapallayil
• [Genome] Additional question about C. elegans assemblies   Nathan Gaddis
• [Genome] Affymetrix 500k snp track?   Jennifer Puck
• [Genome] Affymetrix 500k snp track?   Ann Zweig
• [Genome] alignment files for zebrafish7   Deborah Ritter
• [Genome] alignment files for zebrafish7   Robert Kuhn
• [Genome] Alt splicing track   schragas at post.tau.ac.il
• [Genome] Alt splicing track   Hiram Clawson
• [Genome] Alt splicing track   Ann Zweig
• [Genome] archaeal genome browser   Tie Koide
• [Genome] archaeal genome browser   Hiram Clawson
• [Genome] archaeal genome browser   Mike Mitchell
• [Genome] BLAT & microreads   Minghsun Liu
• [Genome] BLAT & microreads   Galt Barber
• [Genome] BLAT & microreads   Ewan Birney
• [Genome] Blat 35-mer perfect matches   Derek Chiang
• [Genome] Blat 35-mer perfect matches   Ann Zweig
• [Genome] BLAT against mm9.2bit   Sukhinder Sandhu
• [Genome] BLAT against mm9.2bit   Hiram Clawson
• [Genome] BLAT result viewing   Yu Zhou
• [Genome] BLAT result viewing   Kayla Smith
• [Genome] BLAT- commandline and web results differ   Tan Hui Hui Jenny
• [Genome] BLAT- commandline and web results differ   Brooke Rhead
• [Genome] BlatBot Error...   Mike McCabe
• [Genome] BlatBot Error...   Kayla Smith
• [Genome] BLATing probe sequences against human genome   Tim Gernat
• [Genome] BLATing probe sequences against human genome   Brooke Rhead
• [Genome] C. elegans assembly ce3   Nathan Gaddis
• [Genome] C. elegans assembly ce3   Hiram Clawson
• [Genome] canFam2 to rheMac2 net file   Ji, Yongmei
• [Genome] canFam2 to rheMac2 net file   Brooke Rhead
• [Genome] Chromosome range   riztyan
• [Genome] Chromosome range   Brooke Rhead
• [Genome] Chromosome range   Brooke Rhead
• [Genome] Closest Gene   Denise Mauldin
• [Genome] Closest Gene   Brooke Rhead
• [Genome] Closest Gene   Brooke Rhead
• [Genome] command line option = 'hide all' for hgTracks   Ginger Cheng
• [Genome] command line option = 'hide all' for hgTracks   Archana Thakkapallayil
• [Genome] custom coloring a bedGraph track?   Ann Zweig
• [Genome] Custom track   McMahon, Francis (NIH/NIMH) [E]
• [Genome] Custom track   Archana Thakkapallayil
• [Genome] Custom Track Question   Jeff Jensen
• [Genome] Custom Track Question   Ann Zweig
• [Genome] ENCODE Comparative Genomics and Variation - "bug"?   Mike Mitchell
• [Genome] ENCODE Comparative Genomics and Variation - "bug"?   Kate Rosenbloom
• [Genome] Entrez Genes?   mousheng xu
• [Genome] Entrez Genes?   Archana Thakkapallayil
• [Genome] EST database   Jennifer Chow
• [Genome] EST database   Kayla Smith
• [Genome] exon and intron locations   yuy.liu at utoronto.ca
• [Genome] exon and intron locations   Kayla Smith
• [Genome] Exon genomic location question   Barb, Jennifer (NIH/CIT) [E]
• [Genome] Exon genomic location question   Ann Zweig
• [Genome] exons and introns of EST   yuy.liu at utoronto.ca
• [Genome] exons and introns of EST   Ann Zweig
• [Genome] expression by tissue   Elize Shirdel
• [Genome] expression by tissue   Archana Thakkapallayil
• [Genome] Finding genes highly expressed in brain   Karen Thatcher
• [Genome] Finding genes highly expressed in brain   Kayla Smith
• [Genome] finding homologe gene   Keren Avital
• [Genome] finding homologe gene   Kayla Smith
• [Genome] Finding nearest genes to a given genomic position   Christoph Bock
• [Genome] Finding nearest genes to a given genomic position   Hiram Clawson
• [Genome] Finding orthologous genes   Keren Avital
• [Genome] Finding orthologous genes   Kayla Smith
• [Genome] Finding orthologous genes   Keren Alice Avital
• [Genome] Finding orthologous genes   Brooke Rhead
• [Genome] finding promoter regions   gvthomas at ucla.edu
• [Genome] finding promoter regions   Kayla Smith
• [Genome] ftp problem   Christina Chaivorapol
• [Genome] ftp problem   Brooke Rhead
• [Genome] Fwd: Repeat consensus length inconsistency?   Angie Hinrichs
• [Genome] FYI: single cell sequencing   Hiram Clawson
• [Genome] Gap information   Christian Olsen
• [Genome] Gap information   Brooke Rhead
• [Genome] GC Percent selected fields   Peter Brooks
• [Genome] GC Percent selected fields   Brooke Rhead
• [Genome] Genome Browser Questions   choi at cabm.rutgers.edu
• [Genome] Genome Browser Questions   Brooke Rhead
• [Genome] haplotype frequency   Susan Gurney
• [Genome] haplotype frequency   Ann Zweig
• [Genome] Hello UCSC Genome browser staff   ארז ליבנה
• [Genome] Hello UCSC Genome browser staff   Kayla Smith
• [Genome] Help please   Slade
• [Genome] Help please   Kayla Smith
• [Genome] hg18 centromere positions   João Fadista
• [Genome] hg18 centromere positions   Robert Kuhn
• [Genome] horse genome   Hauck, Stefanie, Dr.
• [Genome] horse genome   Kayla Smith
• [Genome] How to check for homologies in other species ?   Ann Zweig
• [Genome] Human EST R91986   ????? ???? - Giladi Hilla
• [Genome] Human EST R91986   Brooke Rhead
• [Genome] Input Zfin Ids get gene location   Deborah Ritter
• [Genome] Input Zfin Ids get gene location   Ann Zweig
• [Genome] known Genes and GO   Rosenfeld, Jeffrey
• [Genome] known Genes and GO   Archana Thakkapallayil
• [Genome] knownGenes for mm9   Keith Satterley
• [Genome] knownGenes for mm9   Archana Thakkapallayil
• [Genome] Liftover dies when using BED files with 12 fields?   John Major
• [Genome] Liftover dies when using BED files with 12 fields?   Hiram Clawson
• [Genome] Liftover dies when using BED files with 12 fields?   John Major
• [Genome] Liftover dies when using BED files with 12 fields?   Hiram Clawson
• [Genome] Local BLAT   Michael Mooney
• [Genome] Local BLAT   Brooke Rhead
• [Genome] Local BLAT   Michael Mooney
• [Genome] Local BLAT   Brooke Rhead
• [Genome] lower case Letters and repetetive sequences   shlomit farkash
• [Genome] lower case Letters and repetetive sequences   Brooke Rhead
• [Genome] Lowercase in .net.axt vs .fa files   Martin Frith
• [Genome] Lowercase in .net.axt vs .fa files   Hiram Clawson
• [Genome] miRNA target prediction tracks for current human genome assembly   Anil Jegga
• [Genome] miRNA target prediction tracks for current human genome assembly   Kayla Smith
• [Genome] mirroring from BSC   Alexis Torrano
• [Genome] mirroring from BSC   Brooke Rhead
• [Genome] Mouse Build 37   Bill Dirks
• [Genome] Mouse Build 37   Hiram Clawson
• [Genome] Mouse Build 37   Kayla Smith
• [Genome] Mouse conservation blots...etc..   Carsten Raabe
• [Genome] Mouse conservation blots...etc..   Ann Zweig
• [Genome] multiz   Jay an
• [Genome] multiz   Kayla Smith
• [Genome] multiz17waySummary table   Isabelle Dupanloup
• [Genome] multiz17waySummary table   Kate Rosenbloom
• [Genome] MySQL Access   Greg Dougherty
• [Genome] MySQL Access   Hiram Clawson
• [Genome] MySQL Access   Robert Kuhn
• [Genome] MySQL Access   Robert Kuhn
• [Genome] MySQL Access   Greg Dougherty
• [Genome] MySQL Access   Hiram Clawson
• [Genome] MySQL database   Daniel Leung
• [Genome] MySQL database   Kayla Smith
• [Genome] Need your help   Ma, Jin
• [Genome] Need your help   Brooke Rhead
• [Genome] Need your help   Ma, Jin
• [Genome] non-overlapping gapped global alignements?   Mingkun Li
• [Genome] non-overlapping gapped global alignements?   Brooke Rhead
• [Genome] non-redundant set of refseq or knownGenes exons   Khrebtukova, Irina
• [Genome] non-redundant set of refseq or knownGenes exons   Archana Thakkapallayil
• [Genome] non-redundant set of refseq or knownGenes exons   Khrebtukova, Irina
• [Genome] non-redundant set of refseq or knownGenes exons   Hiram Clawson
• [Genome] non-redundant set of refseq or knownGenes exons   Khrebtukova, Irina
• [Genome] non-redundant set of refseq or knownGenes exons   Khrebtukova, Irina
• [Genome] pack format algorithm   Khrebtukova, Irina
• [Genome] pack format algorithm   Brooke Rhead
• [Genome] pairwise alignment question   Mingkun Li
• [Genome] pairwise alignment question   Kayla Smith
• [Genome] phastCons for mm8   Sung, Myong-Hee (NIH/NCI) [E]
• [Genome] phastCons for mm8   Kayla Smith
• [Genome] phastCons for mm8   Hiram Clawson
• [Genome] please help with large body of queries   Indik Stanislav
• [Genome] please help with large body of queries   Hiram Clawson
• [Genome] problems   Caleb Kallen
• [Genome] problems   Brooke Rhead
• [Genome] publishing screen shots   Julie Segre
• [Genome] Query about EST Annotations data   Viswanath, Lalitha (NIH/NCI) [C]
• [Genome] Query about EST Annotations data   Brooke Rhead
• [Genome] Question   Fatemi, Mehrnaz (NIH/NIEHS) [F]
• [Genome] Question   Ann Zweig
• [Genome] question - opening wig   Angela Stathopoulos
• [Genome] question - opening wig   Hiram Clawson
• [Genome] question - opening wig   Ann Zweig
• [Genome] question - opening wig   Angie Hinrichs
• [Genome] Question about annotation of NM_001002843   bina at purdue.edu
• [Genome] Question about annotation of NM_001002843   Brooke Rhead
• [Genome] Question about no hits by using BLAT   Yu Zhou
• [Genome] Question about no hits by using BLAT   Archana Thakkapallayil
• [Genome] Question about retrieving gene, EST/mRNA names from knownGene table   Wang, Jianmin
• [Genome] Question about retrieving gene, EST/mRNA names from knownGene table   Brooke Rhead
• [Genome] question about SNPs in the UCSC browser   Charla Lambert
• [Genome] question about SNPs in the UCSC browser   Archana Thakkapallayil
• [Genome] Question about transcription factor biding site tracks.   GuhaThakurta, Debraj (Rosetta)
• [Genome] Question about transcription factor biding site tracks.   Ann Zweig
• [Genome] question about UCSC serach   Justyna Rak
• [Genome] question about UCSC serach   Brooke Rhead
• [Genome] Question about your web server software configuration   Mike McCrossin
• [Genome] Question about your web server software configuration   Ann Zweig
• [Genome] Question concerning seq conservation   Richard O'Brien
• [Genome] question on chain data format   zhaoshi
• [Genome] question on chain data format   Kayla Smith
• [Genome] Question on gene length information retrieval   Kangyu Zhang
• [Genome] Question on gene length information retrieval   Brooke Rhead
• [Genome] Question on gene length information retrieval   Kangyu Zhang
• [Genome] Question on gene length information retrieval   Brooke Rhead
• [Genome] Question re: intersecting multiz28way and custom track   Dara Torgerson
• [Genome] question: INTERGENIC regions   Miriami Elana
• [Genome] question: INTERGENIC regions   Kayla Smith
• [Genome] Questions about the conservation tracks   JJ de Ronde
• [Genome] Questions about the conservation tracks   Kate Rosenbloom
• [Genome] refFlat from bosTau2 and bosTau3   João Fadista
• [Genome] refFlat from bosTau2 and bosTau3   Brooke Rhead
• [Genome] refGene.txt IDs vs RefSeq ids   Roel Verhaak
• [Genome] refGene.txt IDs vs RefSeq ids   Kayla Smith
• [Genome] Refseq bug   chrism at sanbi.ac.za
• [Genome] Refseq bug   Archana Thakkapallayil
• [Genome] Refseq START and END sites   Vinayak Kulkarni
• [Genome] Refseq START and END sites   Kayla Smith
• [Genome] Repeat consensus length inconsistency?   mwmessin at ucsd.edu
• [Genome] Retrieving orthologous sequences in different insect species   Thomas Sandmann
• [Genome] Retrieving orthologous sequences in different insect species   Kayla Smith
• [Genome] RP11-85P8   Dominique Muehlematter
• [Genome] RP11-85P8   Archana Thakkapallayil
• [Genome] Running a local database   Camerlengo, Terry
• [Genome] Running a local database   Hiram Clawson
• [Genome] search for il10 yields unexpected/wrong result   Ross Lazarus
• [Genome] search for il10 yields unexpected/wrong result   Ann Zweig
• [Genome] search for il10 yields unexpected/wrong result   Ross Lazarus
• [Genome] Sequence Troubles   Sean Wilson
• [Genome] Sequence Troubles   Brooke Rhead
• [Genome] snp_126 hg18 track issue   Jeltje van Baren
• [Genome] snp_126 hg18 track issue   Kayla Smith
• [Genome] stability of accession numbers   Noboru Jo Sakabe
• [Genome] stability of accession numbers   Kayla Smith
• [Genome] Syntenic Alignments   J.J. Emerson
• [Genome] Syntenic Alignments   Kayla Smith
• [Genome] the identity score of .chain file   Jun Wang
• [Genome] the identity score of .chain file   Archana Thakkapallayil
• [Genome] tiling array   Watson, Joseph
• [Genome] tiling array   Archana Thakkapallayil
• [Genome] tiling array   Hiram Clawson
• [Genome] tiling array   Watson, Joseph
• [Genome] Trace Coverage   J.J. Emerson
• [Genome] Trace Coverage   Brooke Rhead
• [Genome] tRNA genes   Anna Git
• [Genome] tRNA genes   Brooke Rhead
• [Genome] try to get gene symbol   zxu
• [Genome] try to get gene symbol   Ann Zweig
• [Genome] UCSC Gene set   Keith Satterley
• [Genome] UCSC Gene set   Brooke Rhead
• [Genome] UCSC idiogram retrieving   pfreire at mdanderson.org
• [Genome] UCSC idiogram retrieving   Kayla Smith
• [Genome] UCSC structural variation submission   george.zogopoulos at utoronto.ca
• [Genome] Upstream Drosophila sequences   Ioschikhes, Ilya
• [Genome] Upstream Drosophila sequences   Archana Thakkapallayil
• [Genome] WIG display controls: y-axis scaling   Gordon Robertson
• [Genome] WIG display controls: y-axis scaling   Hiram Clawson
• [Genome] wiggle (bedGraph) track point size   Ginger Cheng
• [Genome] wiggle (bedGraph) track point size   Hiram Clawson
• [Genome] wiggle (bedGraph) track point size   Ginger Cheng
• [Genome] wiggle (bedGraph) track point size   Hiram Clawson
• [Genome] X chromosome regions equal to Y   João Fadista
• [Genome] X chromosome regions equal to Y   Brooke Rhead
• [Genome] Yeast genes and regulation   Vinayak Kulkarni
• [Genome] Yeast genes and regulation   Archana Thakkapallayil
• [Genome] zebrafish version 7   Cecilia Moens
• [Genome] zebrafish version 7   Kayla Smith

Last message date: Fri Aug 31 13:52:11 PDT 2007
Archived on: Fri Aug 31 13:52:14 PDT 2007

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