[Genome] MySQL Access

Greg Dougherty gregd at soe.ucsc.edu
Wed Aug 15 17:24:32 PDT 2007


Robert,

A question.  I'm using mysql-connector/J 5.0.6, which, IIRC, expects to 
be talking to mysql 5.x.  I'm assuming it will successfully talk to the 
Genome Browser, since the Server is running MySQL 5.  Is that an 
incorrect assumption?

TIA,

Greg

Robert Kuhn wrote:
> Greg, I should clarify, as hiram gave seemingly contradictory 
> replies.  The server, genome-mysql, is runnign MySQL 5, as hiram
> points out.  The tables, however, are in MySQL 4 format and will
> work on a machine running MySQL 4.
> 
> thanks,
> 		--b0b
> 
>> Robert Kuhn wrote:
>>> Yes, Greg, that is still true.
>>>
>>> 			--b0b kuhn
>>> 			ucsc genome bioinformatics group
>>>
>>>> To: genome at soe.ucsc.edu
>>>> Subject: [Genome] MySQL Access
>>>>
>>>> According to a message by Donna Karolchik in Sept 2004, the Genome 
>>>> Browser MySQL db is publicly accessible and genome-mysql.cse.ucsc.edu, 
>>>> and it's MySQL version 4.0.20.
>>>>
>>>> Are both these facts still true?
>>>>
>>>> TIA,
>>>>
>>>> Greg Dougherty
>>>> _______________________________________________
>>>> Genome maillist  -  Genome at soe.ucsc.edu
>>>> http://www.soe.ucsc.edu/mailman/listinfo/genome
>>>>
>>> _______________________________________________
>>> Genome maillist  -  Genome at soe.ucsc.edu
>>> http://www.soe.ucsc.edu/mailman/listinfo/genome
> 



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