[Genome] pairwise alignment question

[Kayla Smith]

Mingkun,

Please see our FAQ on the "_random" chroms:

http://genome.ucsc.edu/FAQ/FAQdownloads#download10

I hope this information is helpful to you.  Please don't hesitate to 
contact us again if you have further questions.

Kayla Smith
UCSC Genome Bioinformatics Group

Mingkun Li wrote:
> Hello,
> 
> When I was downloading the Human(hg17)/Rh esus pairwise alignment file under
> the directory axtNet/, I found  there were two files available for some
> chromosomes,for example, named chr1_hg17.rheMac2.net.axt.gz    and
> chr1_random.hg17.rheMac2.net.axt.gz    respectively. what's the later file
> with "random" represent?
> 
> Best
> 
> mingkun
> _______________________________________________
> Genome maillist  -  Genome at soe.ucsc.edu
> http://www.soe.ucsc.edu/mailman/listinfo/genome