[Genome] Refseq bug

chrism at sanbi.ac.za chrism at sanbi.ac.za
Tue Aug 7 03:06:44 PDT 2007


Hi -

I am getting the following message:

"Note: some of the identifiers (e.g. NM_138996) have no match in table
refGene, field name or in alias table refLink, field name. Try the
"describe table schema" button for more information about the table and
field."

when I paste a list of Refseq gene names to the 'Tables' section
(clade:vertebrate; genome:human; assembly:March 2006; group:Genes and Gene
Prediction Track; track:Refseq Genes; table:refGene). I find this odd
since I can easily search for NM_138996 and because I am using this Refseq
id because I downloaded it from an earlier analysis under the tables page
of the browser. So why now does it not find this particular Refseq
transcript?

Cheers,
Chris

Computational Postdoc
South African National Bioinformatics Institute (SANBI)
University of Western Cape





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