[Genome] UCSC idiogram retrieving

[Kayla Smith]

Pablo,

I used the Table Browser to retrieve all columns from the 
hg18.cytoBandIdeo table, and I do get chrX data.   Notice that the chrX 
data is between the chr9 and chr10 data.

Also, the table cytoBandIdeo.txt.gz has chrX data at:
http://hgdownload.cse.ucsc.edu/goldenPath/hg18/database/

It's possible that you have a filter set up or that your cart needs to 
be reset.   Try resetting your cart by going to this url:
http://genome.ucsc.edu/cgi-bin/cartReset

Then try retrieving your data again.

I hope this information is helpful to you.  Please don't hesitate to 
contact us again if you require further assistance.

Kayla Smith
UCSC Genome Bioinformatics Group

pfreire at mdanderson.org wrote:
> Dear sirs,
> 
> 
> I think there is a small problem for retrieving the raw tables for the 
> chromosome idiogram. When I selected the parameter 'region' as the whole 
> human genome, the information for the chromosome X was absent. However, 
> when I selected only the chromosome X, no problem has occured. 
> 
> Thanks.
> 
> Pablo Freire.
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