[Genome] Hello UCSC Genome browser staff

ארז ליבנה erezliv at gmail.com
Sun Aug 5 02:41:17 PDT 2007


Hello UCSC Genome browser staff,

I am seeking for specific tables in the annotation database (Human & Mouse)
and am a bit overwhelmed by the size of your database..

Would you be so kind to tell me which tables do I need in order to get (by
genomic coordinates):
- The nearest gene (accession, name,..)
- The nearest repeat
- The nearest CpG islands
- chromosome stain-band
- (if inside a gene) The exon number, The GO annotations

Also, are these tables given per-chromosome or for the entire genome?

Thank you in advance,
Erez Livneh


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