April 2007 Archives by author

• Messages sorted by: [ thread ] [ subject ] [ date ]
• More info on this list...

Starting: Sun Apr 1 13:51:38 PST 2007
Ending: Mon Apr 30 21:32:53 PST 2007
Messages: 236

• [Genome] hg17, repeatmasker and repbase version/release?   Palle Villesen (BiRC)
• [Genome] identifiers   Tim Alcon
• [Genome] orthologous sequences   Tim Alcon
• [Genome] ENSP to refseq conversion   Yael Altuvia
• [Genome] Equine sequence   MIKE BOURSNELL
• [Genome] Standalone BLAT and very short sequences   Galt Barber
• [Genome] BLAT program   Galt Barber
• [Genome] Question on local BLAT for short sequences   Galt Barber
• [Genome] question about Blastz parameters   Michael Beer
• [Genome] DBA genomic sequence   Ewan Birney
• [Genome] rsids mapping to multiple locations   Ewan Birney
• [Genome] Statistics behind the new UCSC gene prediction set   Giuseppe Borsani
• [Genome] over.chain files for liftOver   Emmanuel Buschiazzo
• [Genome] over.chain files   Emmanuel Buschiazzo
• [Genome] one question   Kang (Alex) Chen
• [Genome] [Genome-announce] New UCSC gene prediction set released   Steve Chervitz
• [Genome] [Genome-announce] New UCSC gene prediction set released   Steve Chervitz
• [Genome] humanStrand and chimpStrand in the table snp126orthoPanTro2RheMac2 seem to be mixed up.   Sang Chul Choi
• [Genome] chr"N"_random   Hiram Clawson
• [Genome] Human Centromere and Telomere positions   Hiram Clawson
• [Genome] WIG Data Format Question   Hiram Clawson
• [Genome] hg17, repeatmasker and repbase version/release?   Hiram Clawson
• [Genome] (no subject)   Hiram Clawson
• [Genome] FW: custom track 100 MB size limit? (resend after partial bounce)   Hiram Clawson
• [Genome] FW: custom track 100 MB size limit? (resend after partial bounce)   Hiram Clawson
• [Genome] help with autoscaling wig tracks   Hiram Clawson
• [Genome] help with autoscaling wig tracks   Hiram Clawson
• [Genome] N/A   Hiram Clawson
• [Genome] DBA genomic sequence   Mark Cowley
• [Genome] Gene lenght   Cecilia Daroqui
• [Genome] Re-sequenced ENCODE regions WANTED   Sean Davis
• [Genome] gene model tables question   DeCerbo,Joshua (stu)
• [Genome] downloads for Variation and Repeats tracks   Dmitry
• [Genome] downloads for Variation and Repeats tracks   Dmitry
• [Genome] downloads for Variation and Repeats tracks   Dmitry
• [Genome] downloads for Variation and Repeats tracks   Dmitry
• [Genome] Toronto Database of Genomic Variants as track?   Dowds, Carl
• [Genome] Exon conservation   Isabelle Dupanloup
• [Genome] finding DNase hypersensitive sites   Ehrlich, Melanie
• [Genome] question about 3' UTR sequences   Eldakak, Amr
• [Genome] sequences mapped to the cow genome   João Fadista
• [Genome] Gene positions   Richard J. Feldmann
• [Genome] copy number variation data for human   Feng, Bin
• [Genome] Question about % of exons represented by repeats?   Sarah Finch
• [Genome] Fosmid clones   Brad Foulk
• [Genome] short mm8 chr1 and 2?   Ben Gantner
• [Genome] Some more suggestions for UCSC:   Paul P. Gardner
• [Genome] affymetrix search question   Amrita Ghosh
• [Genome] Re-sequenced ENCODE regions WANTED   Peter Good
• [Genome] Hello all.   Maximilian Haeussler
• [Genome] direction of ESTs   Rachel Harte
• [Genome] gene walking & Unigene cluster mapping   Rachel Harte
• [Genome] gene walking & Unigene cluster mapping   Rachel Harte
• [Genome] gene walking & Unigene cluster mapping   Rachel Harte
• [Genome] chr"N"_random   Rachel Harte
• [Genome] [Genome-announce] New UCSC gene prediction set released   Rachel Harte
• [Genome] copy number variation data for human   Rachel Harte
• [Genome] Hello all.   Rachel Harte
• [Genome] Hello all.   Rachel Harte
• [Genome] (no subject)   Rachel Harte
• [Genome] chain tracks by chromosome / strand   Rachel Harte
• [Genome] (no subject)   Rachel Harte
• [Genome] finding DNase hypersensitive sites   Rachel Harte
• [Genome] finding DNase hypersensitive sites   Rachel Harte
• [Genome] PicTar   Rachel Harte
• [Genome] Affy SNP array tracks not available in Build 36.1 (hg18)   Rachel Harte
• [Genome] (no subject)   Rachel Harte
• [Genome] Danio Rerio annotation GFF file   Rachel Harte
• [Genome] affy 430 chip   Rachel Harte
• [Genome] orthologous genes   Rachel Harte
• [Genome] Vertebrate Multiz Alignment & Conservation   Rachel Harte
• [Genome] blat queries   Rachel Harte
• [Genome] blat queries (fwd)   Rachel Harte
• [Genome] Gene positions   Rachel Harte
• [Genome] Fwd: FW: Mouse Genome Repeat Library   Rachel Harte
• [Genome] UCSC Genome Browser: Dog Genome   Rachel Harte
• [Genome] Jurkat Cell line Expressions   Rachel Harte
• [Genome] short mm8 chr1 and 2?   Rachel Harte
• [Genome] orthologous genes   Rachel Harte
• [Genome] Segmental duplication   Yehudit Hasin
• [Genome] Chained blastz alignments   Angie Hinrichs
• [Genome] WIG Data Format Question   Carole Holl
• [Genome] tfbsConsSites and short sequences in general   Hoover, David (NIH/CIT) [E]
• [Genome] xref with Entrez GENE id and official gene symbols   Fan Hsu
• [Genome] ENSP to refseq conversion   Fan Hsu
• [Genome] download of orthologous genes   Barbara Hutter
• [Genome] xref with Entrez GENE id and official gene symbols   Hisakazu IWAMA
• [Genome] primate alleles snp126 track   Amit Indap
• [Genome] rsids mapping to multiple locations   Amit Indap
• [Genome] Re-sequenced ENCODE regions WANTED   Iris Vargas Jentzsch
• [Genome] chr"N"_random   Nathan Johnson
• [Genome] Chained blastz alignments   Eric Just
• [Genome] please delete: testing list distribution   Matthew Kalastro
• [Genome] messages to genome list lost yesterday & earlier today   Matthew Kalastro
• [Genome] custom tracks for TIN and PIN RNAs in hg17   Donna Karolchik
• [Genome] [Genome-announce] New UCSC gene prediction set released   Jim Kent
• [Genome] (no subject)   Jim Kent
• [Genome] Questions regarding the KnownAlt track .....   Jim Kent
• [Genome] From gene Symbol to Sequence   Khan, Sohail
• [Genome] blat queries   Sung Kim
• [Genome] blat perl script   Sung Kim
• [Genome] Question regarding "Vertebrate Multiz Alignment & Conservation"   Eli Koren
• [Genome] Question regarding "Vertebrate Multiz Alignment & Conservation (17 species)"   Eli Koren
• [Genome] Problems with mirror site at MCW   Kowalski, George
• [Genome] Problems with mirror site at MCW   Kowalski, George
• [Genome] Question regarding annotation of non-coding RNAs   Azra Krek
• [Genome] Problems with mirror site at MCW   Robert Kuhn
• [Genome] genes structure   Thomas Lacroix
• [Genome] Fwd: FW: Mouse Genome Repeat Library   Erez Lieberman
• [Genome] a question about download   Ma, Li
• [Genome] Danio Rerio annotation GFF file   Mayank Maheshwary
• [Genome] (no subject)   Swapan Mallick
• [Genome] (no subject)   Swapan Mallick
• [Genome] (no subject)   Swapan Mallick
• [Genome] (no subject)   Swapan Mallick
• [Genome] (no subject)   Swapan Mallick
• [Genome] GNF Atlas 2 Median Ratios...   Michael Mayhew
• [Genome] kg2ToKg3...   Michael Mayhew
• [Genome] question about drosophila data   Tony Melillo
• [Genome] Browser shows complement, unexpectedly?   Thomas D. Moloshok
• [Genome] (no subject)   Morell, Robert (NIH/NIDCD) [E]
• [Genome] BLAT program   Jittima Piriyapongsa
• [Genome] [Genome-announce] New UCSC gene prediction set released   Steven Pitts
• [Genome] Vertebrate Multiz Alignment & Conservation   Pochareddy, Sirisha
• [Genome] cytogenetic map   Brooke Rhead
• [Genome] Equine sequence   Brooke Rhead
• [Genome] Determining seqs with poor alignments   Brooke Rhead
• [Genome] Question about % of exons represented by repeats?   Brooke Rhead
• [Genome] DBA genomic sequence   Brooke Rhead
• [Genome] Gene lenght   Brooke Rhead
• [Genome] GC-rich human rpts   Brooke Rhead
• [Genome] blat out of memory   Brooke Rhead
• [Genome] (no subject)   Brooke Rhead
• [Genome] Fosmid clones   Brooke Rhead
• [Genome] sequences mapped to the cow genome   Brooke Rhead
• [Genome] Browser shows complement, unexpectedly?   Brooke Rhead
• [Genome] over.chain files   Brooke Rhead
• [Genome] FW: custom track 100 MB size limit? (resend after partial bounce)   Gordon Robertson
• [Genome] FW: custom track 100 MB size limit? (resend after partial bounce)   Gordon Robertson
• [Genome] Determining seqs with poor alignments   Russell, Archie
• [Genome] api for your database?   LIANHE SHAO
• [Genome] cytogenetic map   Niv Sabath
• [Genome] Custom Tracks   Peter Scacheri
• [Genome] Affy SNP array tracks not available in Build 36.1 (hg18)   Charlotte Schjerling
• [Genome] dbSNP track on Genome Browser   Praveen Sethupathy
• [Genome] Evofold seqs conserved up to mouse?   Pete Shepard
• [Genome] Haplotype data of HapMap - ENCODE regions   Makoto Shimada
• [Genome] Haplotype data of HapMap - ENCODE regions   Makoto Shimada
• [Genome] Liftover file from hg8 to a current version   Martin Ingi Sigurðsson
• [Genome] Questions regarding the KnownAlt track .....   Rileen Sinha
• [Genome] Questions regarding the KnownAlt track .....   Rileen Sinha
• [Genome] UCSC Genome Browser: Dog Genome   Joshua C Smith
• [Genome] one question   Kayla Smith
• [Genome] Custom Tracks   Kayla Smith
• [Genome] orthologous sequences   Kayla Smith
• [Genome] From gene Symbol to Sequence   Kayla Smith
• [Genome] need your help to update hapmap browser: refGene.txt   Kayla Smith
• [Genome] affymetrix search question   Kayla Smith
• [Genome] Question regarding annotation of non-coding RNAs   Kayla Smith
• [Genome] kg2ToKg3...   Kayla Smith
• [Genome] download of orthologous genes   Kayla Smith
• [Genome] (no subject)   Kayla Smith
• [Genome] Btau3 released yet?   Smithies, Russell
• [Genome] Genome browser: Multiple alignment download   Stephan Struckmann
• [Genome] need your help to update hapmap browser: refGene.txt   Marcela K. Tello-Ruiz
• [Genome] chrX regions on hg18   Marcela K. Tello-Ruiz
• [Genome] genes structure   Archana Thakkapallayil
• [Genome] genes structure   Archana Thakkapallayil
• [Genome] a question about download   Archana Thakkapallayil
• [Genome] downloads for Variation and Repeats tracks   Archana Thakkapallayil
• [Genome] Statistics behind the new UCSC gene prediction set   Archana Thakkapallayil
• [Genome] GERP score for Encode regions   Archana Thakkapallayil
• [Genome] for help   Archana Thakkapallayil
• [Genome] Statistics behind the new UCSC gene prediction set   Archana Thakkapallayil
• [Genome] for help   Archana Thakkapallayil
• [Genome] [Genome-mirror] Build release dates   Archana Thakkapallayil
• [Genome] Question regarding "Vertebrate Multiz Alignment & Conservation (17 species)"   Archana Thakkapallayil
• [Genome] Help, does anyone know the default setting of parameters of the webserver--Human BLAT Search?   Archana Thakkapallayil
• [Genome] (no subject)   Archana Thakkapallayil
• [Genome] Graphic display   Archana Thakkapallayil
• [Genome] Evofold seqs conserved up to mouse?   Archana Thakkapallayil
• [Genome] help with autoscaling wig tracks   Nina Thiessen
• [Genome] Using liftover   Joe Trubisz
• [Genome] Btau3 released yet?   Heather Trumbower
• [Genome] Using liftover   Heather Trumbower
• [Genome] Haplotype data of HapMap - ENCODE regions   Heather Trumbower
• [Genome] Haplotype data of HapMap - ENCODE regions   Heather Trumbower
• [Genome] Custom plots   Heather Trumbower
• [Genome] dbSNP track on Genome Browser   Heather Trumbower
• [Genome] rsids mapping to multiple locations   Heather Trumbower
• [Genome] humanStrand and chimpStrand in the table snp126orthoPanTro2RheMac2 seem to be mixed up.   Heather Trumbower
• [Genome] Affy SNP array tracks not available in Build 36.1 (hg18)   Heather Trumbower
• [Genome] Segmental duplication   Heather Trumbower
• [Genome] Segmental duplication   Heather Trumbower
• [Genome] (no subject)   Heather Trumbower
• [Genome] Custom plots   Anton Valouev
• [Genome] Graphic display   Vasta, Valeria
• [Genome] (no subject)   Vasta, Valeria
• [Genome] Hello all.   Wang, Xin
• [Genome] Hello all.   Wang, Xin
• [Genome] Hello all.   Wang, Xin
• [Genome] Help, does anyone know the default setting of parameters of the webserver--Human BLAT Search?   Wang, Xin
• [Genome] chain tracks by chromosome / strand   Dong Xianjun
• [Genome] gene walking & Unigene cluster mapping   Guoliang Xing
• [Genome] gene walking & Unigene cluster mapping   Guoliang Xing
• [Genome] gene walking & Unigene cluster mapping   Guoliang Xing
• [Genome] gene walking & Unigene cluster mapping   Guoliang Xing
• [Genome] How to determine whether a short element is in 5UTR, exon, intron or 3UTR?   Yu Zhou
• [Genome] Question on local BLAT for short sequences   Yu Zhou
• [Genome] question about 3' UTR sequences   Ann Zweig
• [Genome] Entrez gene ID - LocusLink ID for chimp   Ann Zweig
• [Genome] How to determine whether a short element is in 5UTR, exon, intron or 3UTR?   Ann Zweig
• [Genome] Liftover file from hg8 to a current version   Ann Zweig
• [Genome] question about drosophila data   Ann Zweig
• [Genome] Exon conservation   Ann Zweig
• [Genome] downloads for Variation and Repeats tracks   Ann Zweig
• [Genome] tfbsConsSites and short sequences in general   Ann Zweig
• [Genome] question about Blastz parameters   Ann Zweig
• [Genome] chrX regions on hg18   Ann Zweig
• [Genome] primate alleles snp126 track   Ann Zweig
• [Genome] api for your database?   Ann Zweig
• [Genome] Genome browser: Multiple alignment download   Ann Zweig
• [Genome] gene model tables question   Ann Zweig
• [Genome] PicTar   Jay an
• [Genome] orthologous genes   Jay an
• [Genome] genes for specific organ   Jay an
• [Genome] GC-rich human rpts   bina at purdue.edu
• [Genome] N/A   carmen at preventiongenetics.com
• [Genome] direction of ESTs   ericho at eden.rutgers.edu
• [Genome] blat out of memory   ericho at eden.rutgers.edu
• [Genome] Human Centromere and Telomere positions   prith
• [Genome] GERP score for Encode regions   sde at mrc-lmb.cam.ac.uk
• [Genome] custom tracks for TIN and PIN RNAs in hg17   verjo at iq.usp.br
• [Genome] custom tracks for TIN and PIN RNAs in hg17   verjo at iq.usp.br
• [Genome] for help   chen xianggui
• [Genome] affy 430 chip   zentner at salk.edu

Last message date: Mon Apr 30 21:32:53 PST 2007
Archived on: Tue May 1 08:04:05 PST 2007

• Messages sorted by: [ thread ] [ subject ] [ date ]
• More info on this list...