[Genome] finding DNase hypersensitive sites

[Rachel Harte]

Hello Melanie,

Are you talking about the DNaseI Hs from Duke University data that is
mentioned on the ENCODE Project at UCSC page? The data is on the hg17
Genome Browser. There is a portal for hg17 ENCODE data:

http://genome.ucsc.edu/ENCODE/encode.hg17.html

The track is hidden by default, but if you scroll down to the ENCODE
Chromosome, Chromation and DNA Structure group, then you will see a track
control for Duke/NHGRI DNase. You can use this to make the track visible.

Please note that we are going to add some new subtracks to this data set
in the near future.

I hope that this answers your question. If not, please send me further
details about what you trying to find.

Rachel

Rachel Harte
UCSC Genome Bioinformatics Group
http://genome.ucsc.edu


On Thu, 19 Apr 2007, Ehrlich, Melanie  wrote:

> Hi,
>
> I thought that there was a parameter for locating the described
> DNaseI-hypersensitive sites but cannot find it. Please advise.
>
> Melanie Ehrlich
> _______________________________________________
> Genome maillist  -  Genome at soe.ucsc.edu
> http://www.soe.ucsc.edu/mailman/listinfo/genome
>