[Genome] WIG Data Format Question

Hiram Clawson hiram at soe.ucsc.edu
Wed Apr 18 10:37:57 PDT 2007


Good Morning Carole:

Which genome assembly are you loading your wiggle file into, and
what are the names of the chromosomes you have in your input file ?

Which other genome browsers are you talking about that use WIG format
where it functions OK ?

--Hiram

Carole Holl wrote:
> I am generating a WIG data file using the variable step format.  When I
> try to load the data into the UCSC Genome Browser online (and hit the
> "Submit" button), I get the error message 
> 
>  Error File 'wigfile.wig' - track load error:
> Couldn't find size of chromosome 1
> 
> 
> What does this message mean?  The same data file displays correctly in
> other genome browsers that use the WIG format.
> 
> 
> Thank you,
> 
> Carole
> 
> Carole Holl
> 
> Software Quality Analyst
> 
> Ph: (406) 585-8137 
> 
> Golden Helix, Inc. 
> 
> www.goldenhelix.com <http://www.goldenhelix.com/> 
> 
> Accelerating the Quest for Significance


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