[Genome] ENSP to refseq conversion

Fan Hsu fanhsu at soe.ucsc.edu
Mon Apr 16 11:12:14 PDT 2007


Hi Yael,

I assume that you should be able to get the cross-reference from Ensembl's
Biomart.

Or, you could do a joint between the ensGtp, knownToEnsembl, and
knownToRefSeq table
to get what you want.

Fan.
-----Original Message-----
From: genome-bounces at soe.ucsc.edu [mailto:genome-bounces at soe.ucsc.edu]On
Behalf Of Yael Altuvia
Sent: Saturday, April 14, 2007 2:11 AM
To: genome at soe.ucsc.edu
Subject: [Genome] ENSP to refseq conversion


Hi,

I have a list of ensmar protein accessions (ENSP...) and I would like to
convert them to refseq entries
What would be the best way to do it?

Thanks
Yael
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