[Genome] custom tracks for TIN and PIN RNAs in hg17

verjo@iq.usp.br verjo at iq.usp.br
Sat Apr 7 19:59:54 PDT 2007


Dear colleagues:

We would like to contribute our custom tracks to hg17 browser, which  
we think will be of interest to a number of investigators.

The track named TIN_RNAs show the genome mapping coordinates of all  
55,139 Totally Intronic Noncoding RNA (TIN RNA) transcripts that we  
have identified in the human genome, as described in our paper in  
Genome Biology (see enclosed).
The track files in PSL format can be retrieved from Genome Biology website:
http://genomebiology.com/imedia/1795171211288678/supp13.psl

The track named PIN_RNAs show the mapping coordinates of all 12,592  
Partially Intronic Noncoding RNA (PIN RNA) transcripts, as described  
in our paper.
http://genomebiology.com/imedia/2029173154128867/supp14.psl

Finally, the track named TIN_PIN_probes shows the genomic coordinates  
of all TIN and PIN sense and antisense intronic probes plus the exonic  
probes in our custom-designed 44K intron-exon oligoarray. This array  
was used for our gene expression experiments with prostate, kidney and  
liver human tissues.
http://genomebiology.com/imedia/1258251625128868/supp16.psl

Please let us know if you need any additional information.

Sincerely,
Sergio Verjovski-Almeida
Eduardo M. Reis
Helder I. Nakaya



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