[Genome] Haplotype data of HapMap - ENCODE regions

[Heather Trumbower]

Makoto:

The first line of
http://www.hapmap.org/downloads/phasing/2005-03_phaseI/00README.txt
"Phasing was done using the Phase I / rel#16a  datafiles".

It seems that 
http://www.hapmap.org/downloads/phasing/2006-07_phaseII/00README.txt
doesn't mention data version, but I'm quite sure it is release 21.

However I would recommend that you confirm by writing to help at hapmap.org 
as they are the data providers and would be happy to help you.

Heather Trumbower
UCSC Genome Bioinformatics Group


On Fri, 6 Apr 2007, Makoto Shimada wrote:

> Heather:
> Thank you so much for your prompt reply.
> I understand and I am inspecting the following directory,
> http://www.hapmap.org/downloads/phasing/2005-03_phaseI/ENCODE/ .
> This looks suitable data for my intention.
>
> I would like to ask further question about this data.
> The directory /downloads/phasing contains two subdirectories,
> 2005-03_phaseI/and 2006-07_phaseII/.
> Do the dates (2005-03 & 2006-7) in these subdirectories represent fixed
> date of genotype data used?  If so, these two phased data have been
> derived from following two genotype data, respectively?
> http://www.hapmap.org/genotypes/
> 2005-03_16a_phaseI/
> 2006-07/
> Could you tell me whether I understand correctly?
>
>