[Genome] Custom tracks
Kate Rosenbloom
kate at soe.ucsc.edu
Mon Oct 23 12:15:05 PDT 2006
Hello Peter,
We are able to duplicate your problem -- it appears that
the support for CGI's invoked from custom tracks URL's
is no longer working as before. We will notify
you when we have a fix in place. Sorry for the inconvenience!
Cheers,
Kate
---
Kate Rosenbloom
UCSC Genome Bioinformatics
> Peter Chines <pchines at mail.nih.gov> writes:
>> Hello,
>>
>> I notice that there have been big changes to the handling of custom
>> tracks. While in general I think these changes are great, I'm having
>> some difficulty changing my programs to adapt to the new system, and
>> wonder if you can give me some pointers.
>>
>> In the past, I used a local webserver to generate a redirect to the
>> URLs like the following:
>>
>> http://genome.ucsc.edu/cgi-bin/hgTracks?db=hg17&hgt.customText=http://fusion.nhgri.nih.gov/ucsc/nph-tracks.cgi?snp=rs5400%26pval=p_snp
>>
>> This used to work, retrieving a set of custom tracks generated from our
>> local database and displaying them in the browser.
>>
>> I have tried to adapt this to the new custom tracks system, but I've
>> found that even entering this URL:
>>
>> http://fusion.nhgri.nih.gov/ucsc/nph-tracks.cgi?snp=rs5400&pval=p_snp
>>
>> manually on the Add Custom Tracks page does not work (it simply returns
>> the Add Custom Tracks page again). On the other hand, submitting the
>> actual text of the tracks does seem to work. I am obviously doing
>> somethign wrong, but don't know what. Any hints you could give would be
>> much appreciated. Ultimately, I'd like to end up with a URL that I can
>> redirect my users to that will allow them to see our custom tracks
>> (which are generated on the fly, not stored) in the UCSC browser.
>>
>> Thanks,
>> Peter
>>
>>
>> ----------------------------------------------------------------
>> Peter Chines Computer Scientist
>> Genome Technology Branch FUSION Study Group
>> National Human Genome Research Institute
>> National Institutes of Health
>> 50 South Drive, Room 5318, MSC 8004 pchines at mail.nih.gov
>> Bethesda, MD 20892-8004 +1-301-435-6075
>> ----------------------------------------------------------------
>> _______________________________________________
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