[Genome] encodeStanfordMeth data
Adam Auton
adam at adamauton.com
Mon Oct 23 07:47:15 PDT 2006
Hello,
I am currently trying to work with the encode Stanford Methylation
data in the UCSC database. However, I am a little confused as to the
data format.
The data format is as follows:
bin chrom chromStart chromEnd dataValue
1713 chr1 147971133 147971183 0.2491
1713 chr1 147971171 147971221 0.2136
1713 chr1 147971209 147971259 0.1493
1713 chr1 147971247 147971297 0.1374
1713 chr1 147971285 147971335 0.157
1713 chr1 147971323 147971373 0.1686
1713 chr1 147971361 147971411 0.195
1713 chr1 147971399 147971449 0.2184
1713 chr1 147971437 147971487 0.3912
1713 chr1 147971475 147971525 0.3883
I notice that the chromStart and chromValues overlap. Using the
above table, what value would I use at, say, position 147,971,175?
Many thanks,
Adam
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