[Genome] Conservation

Brooke Rhead rhead at soe.ucsc.edu
Thu Oct 12 10:00:58 PDT 2006


Hello Sajid,

Our mail handling program strips attachments from messages.  Could you 
re-send your attachment just to me?

--
Brooke Rhead
UCSC Genome Bioinformatics Group


Sajid Malik wrote:
> Dear Colleague,
> 
> I want to document the conservation display scores for the conserved 
> non-coding elements. Certain elements are broken into small blocks and 
> the score is split on the "phastcons conserved elements" (file 
> attached). Could you please tell if the score for the whole area could 
> be aggregated (score 2305 = 714+ 365+  365+ 336+ 273+ 252 for the 
> conserved region as shown in attached file) or I could only take the 
> score for the biggest block in conserved area.
> 
> Best regards,
> Sajid Malik
> 
> 
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> 
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