[Genome] [genome]How to predict the origin region?

=?gb2312?B?u8YguqM=?= hwanghai at hotmail.com
Wed Nov 22 23:25:33 PST 2006


Hello,
      I would like to predict the ¡°rep_origin¡± and ¡°repeat_region¡± in a 
cryptical plasmid. Which software is capable doing this work? I have 
sequenced a cryptical plasmid and assembled all segments, which is very 
small, is only 3592bp in length. The ORF were chose by ¡°Getorf¡± and ¡°
ORFfind¡±, respectively. But, I still didn¡¯t know how to predict its 
origin region and some repeat region. Thank you in advance for any advice!
  

Best wishes,
Hai

-- 
Dr. Hai Huang
Department of Clinical Biochemistry
Guiyang Medical College
Guiyang, 550004
China

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