[Genome] Question regarding Tabe Browser

Anton Kratz anton.kratz at googlemail.com
Wed Nov 22 05:32:12 PST 2006


Dear UCSC Team,

I have a question regarding the Table Broswer.

I have a list of ~11.000 Genes in "Entrez Gene ID" format. I need to find
the following information (for a project in connection with my Ph.D.) about
each of the genes: Startpostion, Endpostion, Chromosome, Strand orientation.

Is there any way how I can find this out via the Table Browser of UCSC?

I used these settings (among others):
group: Genes and Gene prediction tracks
track: Geneid genes
table: geneid

But I'm not sure this are Gene IDs in the sense of Entrez Gene ID or
LocusLink ID, b/c the positions don't match.

I'd be very thankful if you could point me how to retrieve the positions,
chromosomes and strand orientations for a given list of Entrez Gene IDs, if
possible.

Best regards,
Anton

-- 
Dipl.-Inf. Anton Kratz

14-1 Babacho, Tsuruoka 997-0035 Japan
997-0035 山形県鶴岡市馬場町 14-1

mobile phone:  +81 [0]80-309-489-78
email: anton.kratz at googlemail.com
Skype ID: anton.kratz


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