[Genome] a bug?

Silvia Jimenez Silvia.Jimenez at isb-sib.ch
Wed Nov 15 13:52:53 PST 2006


Dear Sir

Is there a problem with 'BLAT'?

1) I have the following GenBank/EMBL sequence BC088267;  and I wanted to 
'Blat' it but I retrieve no results (very bad matches on the genome). On 
the other hand if I take this sequence and perform a blast on the Rat 
genome at the NCBI the sequence perfectly matches the genome.(this 
happened only with Rat Blat).

2) There was another problem that seems to be resolved, after "blating" 
when one went to details and when one wanted to click on together, there 
was an error but it seems to be OK now.

Many thanks for your useful tool, there is a life before and after Blat.

Silvia

-- 
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Silvia Jimenez
Swiss Institute of Bioinformatics
CMU - 1, rue Michel Servet                Tel. (+41 22) 379 49 41
CH - 1211 Geneva 4 Switzerland            Fax  (+41 22) 379 58 58
Silvia.Jimenez at isb-sib.ch                 http://www.expasy.org/
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