
Krishna M. Roskin: Home Page

About me.
My name is Krishna Roskin. I am a computer science graduate student at the University of California, Santa Cruz. Currently, I am working at the Center for Biomolecular Science & Engineering under Professor David Haussler. My research interests are in the area of comparative genomics.
I graduated from the University of California, Santa Cruz with a degree in mathematics and computer science.

News.
- Jan. 23, 2005: The HHMI bulliten has a little one page write up of me.
- Apr. 29, 2004: Despite the record breaking heat, I've managed to update the list of publications.
- Jan. 21, 2004: There is profile of me in the online version of UC Santa Cruz Currents. It's written by Tim Stephens.
- Nov. 1, 2003: I have a lot to do. So instead of doing any of it, I made a favicon. As you could have guessed, it's a little bar code. It may not display correctly (some times the SOE favicon overrides it) but it will show up if you bookmark this page.
- Oct. 23, 2003: The new web site has been completed. I've moved to a new table-free layout that is heavily dependent on CSS. I took most of the updated code from the good people at glish.com which is a great resource for CSS layout techniques. Another great resource is A List Apart. I also took the time to validate this site as XHTML 1.1 and CSS. This is my plug for supporting modern web standards.

Publications.
This is a selected list of my published publications with links to electronic versions. A more complete list is available in HTML and BibTeX. (Updated Apr. 29, 2004)
- Rat Genome Sequencing Project Consortium. "Genome sequence of the Brown Norway rat yields insights into mammalian evolution." Nature 428, 493-521, 2004.
- S. Yang, A. F. Smit, S. Schwartz, F. Chiaromonte, K. M. Roskin, D. Haussler, W. Miller, and R. C. Hardison. "Patterns of insertions and their covariation with substitutions in the rat, mouse, and human genomes." Genome Research 14:4, 517-527, 2004.
- M. I. Jensen-Seaman, T. S. Furey, B. A. Payseur, Y. Lu, K. M. Roskin, C.-F. Chen, M. A. Thomas, D. Haussler, and H. J. Jacob. "Comparative recombination rates in the rat, mouse, and human genomes." Genome Research 14:4, 528-538, 2004.
- Krishna M. Roskin, Mark Diekhans, and David Haussler. "Scoring Two-Species Local Alignments to Try to Statistically Separate Neutrally Evolving from Selected DNA Segments." Seventh Annual International Conference on Research in Computational Molecular Biology (RECOMB), April, 2003.
- Mouse Genome Sequencing Consortium. "Initial sequencing and comparative analysis of the mouse genome." Nature 420, 520-562, 2002.
- R. C. Hardison, K. M. Roskin, S. Yang, M. Diekhans, W. J. Kent, R. Weber, L. Elnitski, J. Li, M. O'Connor, D. Kolbe, S. Schwartz, T. S. Furey, S. Whelan, N. Goldman, A. Smit, W. Miller, F. Chiaromonte, and D. Haussler. "Covariation in frequencies of substitution, deletion, transposition and recombination during eutherian evolution." Genome Research 13:1, 13-26, 2003.